RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RNASEH2CQ8TDP1 164 aaKnown RBP8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 APH1AQ96BI3 265 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 C12orf49Q9H741 205 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 OR5B21A6NL26 309 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 TMEM250H0YL14 139 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 CEBPDP49716 269 aaPredicted RBP8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 GNB2P62879 340 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 NRN1LQ496H8 165 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 FAM78BQ5VT40 261 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 TGIF2LYQ8IUE0 185 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 SLC24A4Q8NFF2 622 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 TMEM170AQ8WVE7 144 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 ZDHHC16Q969W1 377 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 TMEM18Q96B42 140 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 NUDT11Q96G61 164 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 ALKBH7Q9BT30 221 aaPredicted RBP8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 OR2J1Q9GZK6 312 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 MPC1Q9Y5U8 109 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 USF3Q68DE3 2245 aa8.86□□□□□ -0.99
CX3CL1-201ENST00000006053 CCL25O15444 150 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 ZG16O60844 167 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 OR10P1Q8NGE3 313 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 TMEM147Q9BVK8 224 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 BOKQ9UMX3 212 aaPredicted RBP8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 ZFP30Q9Y2G7 519 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 COX5AP20674 150 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 ARR3P36575 388 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 ATP6V1FQ16864 119 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 CST9LP1Q5W188 147 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 TMEM108Q6UXF1 575 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 NEIL1Q96FI4 390 aaPredicted RBP8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 LINC00470Q9BZP3 86 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 OR2D2Q9H210 308 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 GSX1Q9H4S2 264 aaPredicted RBP8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 TUBG2Q9NRH3 451 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 NBASA2RRP1 2371 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 ODAMA1E959 279 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 J3QT63 122 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 M0QZ24 198 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 CDIPTO14735 213 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 MT-CO3P00414 261 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 CDC34P49427 236 aaPredicted RBP8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 RPL30P62888 115 aaKnown RBP8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 MSMO1Q15800 293 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 MCEMP1Q8IX19 187 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 OR1L1Q8NH94 360 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 ANAPC16Q96DE5 110 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 ACY3Q96HD9 319 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 TIMM9Q9Y5J7 89 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 TECTAO75443 2155 aa8.85□□□□□ -0.99
CX3CL1-201ENST00000006053 FRYQ5TBA9 3013 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 IGKV3D-15A0A087WSY6 115 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 A0A0U1RQK1 487 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 A0A1B0GUS0 222 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 ZNF320A2RRD8 509 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 C11orf94C9JXX5 98 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 HPRT1P00492 218 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 MPLP40238 635 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 LHX2P50458 406 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 COL5A1-AS1Q5SY13 56 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 ZNF497Q6ZNH5 498 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 NUFIP2Q7Z417 695 aaKnown RBP8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 STRADBQ9C0K7 418 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 MANBALQ9NQG1 85 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 OR6C3Q9NZP0 311 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 GTF3C1Q12789 2109 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 NKX6-3A6NJ46 265 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 RNF212BA8MTL3 300 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 S1PR2O95136 353 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 GRPP07492 148 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 MAGEA5P43359 124 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 COA6Q5JTJ3 125 aaKnown RBP8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 ACTL10Q5JWF8 245 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 KCNIP4Q6PIL6 250 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 MOB1BQ7L9L4 216 aa8.84□□□□□ -0.99
CX3CL1-201ENST00000006053 PGPEP1LA6NFU8 196 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 NPIPB11E5RHQ5 1161 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 CNN1P51911 297 aaKnown RBP8.83□□□□□ -1
CX3CL1-201ENST00000006053 LINC00205P59089 165 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 HOXA4Q00056 320 aaPredicted RBP8.83□□□□□ -1
CX3CL1-201ENST00000006053 ACOT6Q3I5F7 207 aaPredicted RBP8.83□□□□□ -1
CX3CL1-201ENST00000006053 C1orf194Q5T5A4 169 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 SCCPDHQ8NBX0 429 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 OR52L2PQ8NGH6 319 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 NPCDR1Q9BY65 106 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 PKIBQ9C010 78 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 PRO3102Q9H379 93 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 HSPB7Q9UBY9 170 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 DOCK10Q96BY6 2186 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 LRRC30A6NM36 301 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 FAM90A26D6RGX4 464 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 SS18L1O75177 396 aaPredicted RBP8.83□□□□□ -1
CX3CL1-201ENST00000006053 IL6RP08887 468 aaPredicted RBP8.83□□□□□ -1
CX3CL1-201ENST00000006053 NPPCP23582 126 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 CLDN18P56856 261 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 GCSAMLQ5JQS6 135 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 TMPRSS7Q7RTY8 843 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 WDR86Q86TI4 376 aa8.83□□□□□ -1
CX3CL1-201ENST00000006053 GCNT2Q8N0V5 402 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms