RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Trav12-1A0N8R1 115 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr1104A2AVB5 310 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm14597A2CFG5 200 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 H2-EaP01904 255 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 P04224 255 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Rims4P60191 269 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gp49aQ61450 303 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 ApoolQ78IK4 265 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tctn3Q8R2Q6 595 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Sun5Q9DA32 373 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Defb3Q9WTL0 63 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tmem156A0A1D5RLR8 321 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Rd3lB2RV38 197 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr1496B9EHG2 317 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 A630073D07RikE9PWS6 100 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Fpr2O88536 351 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Hoxa6P09092 232 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Rag2P21784 527 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Sult4a1P63046 284 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Rbp2Q08652 134 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 LipnQ3U4B4 400 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 PnkdQ69ZP3 385 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Srsf7Q8BL97 267 aaKnown RBP17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm10600Q8BQ57 223 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Cd200r5Q8BTP3 270 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Nhlrc3Q8CCH2 347 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Vmn1r37Q8R2E4 302 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Degs2Q8R2F2 323 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Arl6ip5Q8R5J9 188 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 CsprsQ99388 208 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Arrdc1Q99KN1 434 aa17.84■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Med12lQ8BQM9 2157 aa17.83■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Ighv9-2A0A0B4J1J4 117 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr1348F6VB59 318 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm20815J3KMI0 227 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm3727J3QM54 205 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm20914J3QME2 227 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 DhodhO35435 395 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Tnfsf10P50592 291 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Tbrg1Q3UB74 406 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Mfsd4b3Q3UN21 355 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Zfp941Q3URY5 674 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Bloc1s3Q5U5M8 195 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Epha5Q60629 876 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Adh7Q64437 374 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm21292Q78EE2 227 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Mbnl2Q8C181 373 aaKnown RBP17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 CrhQ8CIT0 187 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Slc35e4Q8K3D6 351 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr539Q8VGL9 319 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Mrps24Q9CQV5 167 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Rnase6Q9D244 153 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Plp2Q9R1Q7 152 aa17.83■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm21294A0A087WS79 222 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr1112A2ATA0 318 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Tmem182B2RVY9 229 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Slc38a6G3UVW3 457 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm21797J3QNW5 180 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm21915J3QPM7 133 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ninj1O70131 152 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Cd5P13379 494 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ufd1P70362 307 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm12253Q5NC48 229 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Scml4Q80VG1 408 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 JkampQ8BI36 311 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gipc3Q8R5M0 297 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr137Q8VFC2 312 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Elp5Q99L85 300 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Mansc1Q9CR33 414 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Stpg1Q9D2F5 341 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Crim1Q9JLL0 1037 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Cav2Q9WVC3 162 aa17.82■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Scgb1b30A2BH64 92 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr1335B2RVY8 335 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Pwwp2bE9Q9M8 600 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Slc17a3G3UWD9 498 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Speer4eK7N6S8 255 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Vmn1r80L7N1Z3 308 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 P01649 108 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Evx1P23683 416 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 TspoP50637 169 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ccl7Q03366 97 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 B3gnt8Q8R3I9 389 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Hacd1Q9QY80 281 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm45716A0A1B0GRQ0 93 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr789A0A1L1SV77 312 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ube2dnl1A2AFH1 155 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr898L7N1Z5 316 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Mtatp6P00848 226 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 CfdP03953 259 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Fgf2P15655 154 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 AhsgP29699 345 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Vmn1r236Q05A06 334 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 McidasQ3UZ45 379 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 2900092C05RikQ5I0V9 184 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Zfp30Q60585 533 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Flrt1Q6RKD8 674 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Zfp429Q7M6Y0 485 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr1427Q8VFU9 311 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Cysltr2Q920A1 309 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms