RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 GSKIPQ9P0R6 139 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 SESN1Q9Y6P5 492 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 LOC105371242A0A075B767 164 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 PIGBOS1A0A0B4J2F0 54 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 RAB29O14966 203 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 PROP1O75360 226 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 IGHV2-5P01817 119 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 IGHV1-8P0DP01 117 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 DUTP33316 252 aaKnown RBP10.71□□□□□ -0.69
PHGDH-221ENST00000641573 LPAR6P43657 344 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 ATP5J2P56134 94 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 IL15RAQ13261 267 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 LRRC37A5PQ49AS3 106 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 OR2B11Q5JQS5 317 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 LAMTOR1Q6IAA8 161 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 ODF3L1Q8IXM7 274 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 TCTEX1D1Q8N7M0 179 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 ZBTB8BQ8NAP8 495 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-221ENST00000641573 BPESC1Q9GZL8 116 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.69
PHGDH-221ENST00000641573 SONP18583 2426 aaKnown RBP10.7□□□□□ -0.7
PHGDH-221ENST00000641573 FXYD6-FXYD2A0A087WZ82 144 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 A0A087X0M5 115 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 SAA2-SAA4A0A096LPE2 208 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 A0A1B0GX30 115 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 LINC00473A8K010 186 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 MPC2O95563 127 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 IGKV1-39P01597 117 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 RBP4P02753 201 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 IGKV1D-39P04432 117 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 LIPFP07098 398 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 SAA2P0DJI9 122 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-221ENST00000641573 SLC25A4P12235 298 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 PAX1P15863 534 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 VDAC1P21796 283 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 PSMB6P28072 239 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 LINC00205P59089 165 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 NCR3LG1Q68D85 454 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 C1orf229Q6ZS94 237 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-221ENST00000641573 SPAG16Q8N0X2 631 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 LINC00311Q8N616 119 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 C8orf31Q8N9H6 132 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 DRAXINQ8NBI3 349 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-221ENST00000641573 CLDND2Q8NHS1 167 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 FAM168AQ92567 244 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 ZNF251Q9BRH9 671 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 PIMREGQ9BSJ6 248 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 TMEM133Q9H2Q1 129 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 PLSCR3Q9NRY6 295 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 FAM212BQ9NTI7 297 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-221ENST00000641573 ZNRD1Q9P1U0 126 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 ONECUT1Q9UBC0 465 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 HSPB11Q9Y547 144 aa10.7□□□□□ -0.7
PHGDH-221ENST00000641573 hCG_1809904A0A1W2PP81 198 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 A0A1W2PPE2 198 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 A0A1W2PR64 198 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 A0A1W2PRV1 198 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 HMSDA8MTL9 139 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 J3QR06 171 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 NDUFS8O00217 210 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 RAMP3O60896 148 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 RPA2P15927 270 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 BRWD1-AS2P59051 145 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 LMO4P61968 165 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 ZNF816Q0VGE8 651 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-221ENST00000641573 RAB32Q13637 225 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 LGALSLQ3ZCW2 172 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-221ENST00000641573 NMSQ5H8A3 153 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 C11orf87Q6NUJ2 197 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 CLEC2AQ6UVW9 174 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 ABHD12Q8N2K0 398 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 OR9G1Q8NH87 305 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 RNASE11Q8TAA1 199 aaKnown RBP10.69□□□□□ -0.7
PHGDH-221ENST00000641573 THAP6Q8TBB0 222 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 ZNF596Q8TC21 504 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 GPR146Q96CH1 333 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 S1PR3Q99500 378 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 SPIN2AQ99865 258 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 SPIN2BQ9BPZ2 258 aa10.69□□□□□ -0.7
PHGDH-221ENST00000641573 USF3Q68DE3 2245 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 TOR1AO14656 332 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 ARPC5O15511 151 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 IGKV1-5P01602 117 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 ZFP36P26651 326 aaKnown RBP10.68□□□□□ -0.7
PHGDH-221ENST00000641573 THBS3P49746 956 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 S100A10P60903 97 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 THOC7Q6I9Y2 204 aaKnown RBP10.68□□□□□ -0.7
PHGDH-221ENST00000641573 TMEM65Q6PI78 240 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 FAM219AQ8IW50 185 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 OR10X1Q8NGY0 326 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 CD300LFQ8TDQ1 290 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 LSM10Q969L4 123 aaKnown RBP10.68□□□□□ -0.7
PHGDH-221ENST00000641573 ADTRPQ96IZ2 230 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 RNF126Q9BV68 326 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 MBD2Q9UBB5 411 aa10.68□□□□□ -0.7
PHGDH-221ENST00000641573 A0A0G2JRQ6 117 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 VWC2LB2RUY7 222 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 H0YIZ8 118 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 M0R1W7 72 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms