RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SLC35D1Q9NTN3 355 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 NUDT15Q9NV35 164 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 YLPM1P49750 1951 aaKnown RBP10.5□□□□□ -0.73
PHGDH-218ENST00000641491 CR1P17927 2039 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 ATRQ13535 2644 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 TRAV6A0A075B6T7 132 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 INAFM1C9JVW0 142 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 TIMM23O14925 209 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 PLA2G10O15496 165 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 FCGR3BO75015 233 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 DHFRP00374 187 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 TCRBP04435 133 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 H2AFB2P0C5Z0 115 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 PI3P19957 117 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 SLC6A1P30531 599 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 GNRHRP30968 328 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF137PP52743 207 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 RAB25P57735 213 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 UBE2MP61081 183 aaKnown RBP10.49□□□□□ -0.73
PHGDH-218ENST00000641491 SRPXP78539 464 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 PLGLAQ15195 96 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 OR2B11Q5JQS5 317 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 C9orf139Q6ZV77 190 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 TBC1D26Q86UD7 250 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 TCTEX1D1Q8N7M0 179 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 DRAXINQ8NBI3 349 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-218ENST00000641491 MINDY2Q8NBR6 621 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 OR5R1Q8NH85 324 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 AGMATQ9BSE5 352 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 GPN1Q9HCN4 374 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-218ENST00000641491 KIAA1456Q9P272 454 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 WASHC3Q9Y3C0 194 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 KIAA2026Q5HYC2 2103 aa10.49□□□□□ -0.73
PHGDH-218ENST00000641491 TMEM11P17152 192 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 RND3P61587 244 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 RPS16P62249 146 aaKnown RBP10.48□□□□□ -0.73
PHGDH-218ENST00000641491 DHRS7BQ6IAN0 325 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-218ENST00000641491 C1orf229Q6ZS94 237 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-218ENST00000641491 NRARPQ7Z6K4 114 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 PDPNQ86YL7 162 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 SPAG16Q8N0X2 631 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 OR2T10Q8NGZ9 312 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 SSMEM1Q8WWF3 244 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 FLYWCH2Q96CP2 140 aaKnown RBP10.48□□□□□ -0.73
PHGDH-218ENST00000641491 SSX3Q99909 188 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF251Q9BRH9 671 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 RAB18Q9NP72 206 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 C1RLQ9NZP8 487 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 GPR132Q9UNW8 380 aa10.48□□□□□ -0.73
PHGDH-218ENST00000641491 HIVEP2P31629 2446 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 NBEAL1Q6ZS30 2694 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 IGHV3-72A0A0B4J1Y9 119 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 C3orf85A0A1B0GTC6 90 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 SHOXO15266 292 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 MPPED1O15442 326 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 PGLYRP1O75594 196 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-218ENST00000641491 FSHBP01225 129 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 IFNA2P01563 188 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 IGKV1D-33P01593 117 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 IGKV1-33P01594 117 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 HLA-AP01891 365 aaKnown RBP10.47□□□□□ -0.73
PHGDH-218ENST00000641491 CD1BP29016 333 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 DUTP33316 252 aaKnown RBP10.47□□□□□ -0.73
PHGDH-218ENST00000641491 DHODHQ02127 395 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 AANATQ16613 207 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 DEFB112Q30KQ8 113 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 TMEM128Q5BJH2 165 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 UTF1Q5T230 341 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 GLDNQ6ZMI3 551 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF695Q8IW36 515 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 OR4C13Q8NGP0 309 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 COQ8AQ8NI60 647 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 TSNAXQ99598 290 aaKnown RBP10.47□□□□□ -0.73
PHGDH-218ENST00000641491 NABP2Q9BQ15 211 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 VSIG4Q9Y279 399 aa10.47□□□□□ -0.73
PHGDH-218ENST00000641491 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.738e-8■■□□□ 12.2
PHGDH-218ENST00000641491 NCBP2LA6PVI3 153 aaKnown RBP10.46□□□□□ -0.73
PHGDH-218ENST00000641491 INMT-MINDY4F8WBC2 141 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 H0Y980 276 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 LY6LH3BQJ8 138 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 H3BUX3 64 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 CREBL2O60519 120 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-218ENST00000641491 PRAF2O60831 178 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 PEX14O75381 377 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 CRYZL1O95825 349 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 MOSP00540 346 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 HRASP01112 189 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 SNRNP70P08621 437 aaKnown RBP10.46□□□□□ -0.73
PHGDH-218ENST00000641491 FAM157CP0CG43 387 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 CT45A6P0DMU7 189 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 CT45A5P0DMU8 189 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 CT45A7P0DMV0 189 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 F2RP25116 425 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 AKR1C2P52895 323 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 IFITM3Q01628 133 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 VMA21Q3ZAQ7 101 aa10.46□□□□□ -0.73
PHGDH-218ENST00000641491 ARSJQ5FYB0 599 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms