RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 C20orf202A1L168 122 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF729A6NN14 1252 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 PHOX2AO14813 284 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 EDN3P14138 238 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 OR3A1P47881 315 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 SPCS3P61009 180 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 LRRC75BQ2VPJ9 315 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 PPP1R32Q7Z5V6 425 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 MDP1Q86V88 176 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 MRGPRDQ8TDS7 321 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 MS4A10Q96PG2 267 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 A0A0G2JMM0 328 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 A0A1W2PPB8 328 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 A0A1W2PRS3 328 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 KIR3DP1A8MWS1 328 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 IFNL4K9M1U5 179 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 GALR2O43603 387 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF883P0CG24 379 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 G6PCP35575 357 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ID3Q02535 119 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 LPAL2Q16609 132 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 CMTM2Q8TAZ6 248 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 RNF138Q8WVD3 245 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 COMMD5Q9GZQ3 224 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 PATZ1Q9HBE1 687 aaKnown RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF331Q9NQX6 463 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 OR1A1Q9P1Q5 309 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF292O60281 2723 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 NDUFS6O75380 124 aaKnown RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 GYPAP02724 150 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 LHX2P50458 406 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ERHP84090 104 aaKnown RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 IL15RAQ13261 267 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ACSF3Q4G176 576 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF324BQ6AW86 544 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 OR2Z1Q8NG97 314 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF837Q96EG3 531 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 TRIB1Q96RU8 372 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 AGMATQ9BSE5 352 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 WFDC1Q9HC57 220 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 RPRMQ9NS64 109 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 SYNGR1O43759 233 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 MGST1P10620 155 aaKnown RBP4.73□□□□□ -1.65
SCN3A-210ENST00000640652 GZMHP20718 246 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 ETV3LQ6ZN32 361 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 FGFRL1Q8N441 504 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 ZIC4Q8N9L1 334 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 MTCH1Q9NZJ7 389 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 CENPEQ02224 2701 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 LRRK2Q5S007 2527 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 HBZP02008 142 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 MMP7P09237 267 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-210ENST00000640652 CHRNA7P36544 502 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 TEPPQ6URK8 271 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 TOMM20LQ6UXN7 152 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 TMEM37Q8WXS4 190 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 DMRTA2Q96SC8 542 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 OR2J1Q9GZK6 312 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 TMEM167BQ9NRX6 74 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 M0R143 59 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 FCN1O00602 326 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 DVL1O14640 695 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 OR10X1Q8NGY0 326 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 CHODLQ9H9P2 273 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 SERTAD4Q9NUC0 356 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 P2RY6Q15077 328 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF385CQ66K41 422 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-210ENST00000640652 SLC35E4Q6ICL7 350 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 ETFRF1Q6IPR1 90 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 DBX2Q6ZNG2 339 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 SSX8Q7RTT4 187 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 LRFN3Q9BTN0 628 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 PARLQ9H300 379 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 NGBQ9NPG2 151 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 FUT9Q9Y231 359 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 UNC80Q8N2C7 3258 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 TRAV9-1A0A075B6T8 112 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 RFPL3SP0C7P2 107 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H1BP16401 226 aaKnown RBP4.73□□□□□ -1.65
SCN3A-210ENST00000640652 RAB4AP20338 218 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 HOXA5P20719 270 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 KLF3P57682 345 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-210ENST00000640652 RBMXL3Q8N7X1 1067 aaKnown RBP4.73□□□□□ -1.65
SCN3A-210ENST00000640652 OR10G8Q8NGN5 311 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 DAZAP1Q96EP5 407 aaKnown RBP4.73□□□□□ -1.65
SCN3A-210ENST00000640652 OR4C12Q96R67 309 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 PRNDQ9UKY0 176 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 SHISA7A6NL88 538 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 MT-ND6P03923 174 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 ATP5IP56385 69 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-210ENST00000640652 PMP22Q01453 160 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 TMEM30BQ3MIR4 351 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 FAM78BQ5VT40 261 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 LURAP1LQ8IV03 231 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 KLHDC1Q8N7A1 406 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 LINC00469Q8N7U9 141 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 SGMS2Q8NHU3 365 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 DEFB127Q9H1M4 99 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 TRBV24-1A0A075B6N3 115 aa4.73□□□□□ -1.65
SCN3A-210ENST00000640652 TRAV17A0A0B4J275 112 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms