RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 ZNF343Q6P1L6 599 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 ZNF429Q86V71 674 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 NECAP1Q8NC96 275 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 DTD1Q8TEA8 209 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 CABLES2Q9BTV7 478 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.72□□□□□ -0.53
GFAP-237ENST00000640552 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
GFAP-237ENST00000640552 AURKAIP1Q9NWT8 199 aaPredicted RBP11.72□□□□□ -0.53
GFAP-237ENST00000640552 NDRG3Q9UGV2 375 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 TP53TG5Q9Y2B4 290 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 MDKP21741 143 aaPredicted RBP11.72□□□□□ -0.53
GFAP-237ENST00000640552 UBE2G2P60604 165 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 RAB5BP61020 215 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 TNFRSF9Q07011 255 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 UTF1Q5T230 341 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 Q6ZS49 121 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 OR10P1Q8NGE3 313 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 RNF115Q9Y4L5 304 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 FAM215AQ9Y5M1 114 aa11.72□□□□□ -0.53
GFAP-237ENST00000640552 PRR30Q53SZ7 412 aaPredicted RBP11.71□□□□□ -0.53
GFAP-237ENST00000640552 C1orf185Q5T7R7 199 aa11.71□□□□□ -0.53
GFAP-237ENST00000640552 R3HDM4Q96D70 268 aa11.71□□□□□ -0.53
GFAP-237ENST00000640552 NIPSNAP3BQ9BS92 247 aa11.71□□□□□ -0.53
GFAP-237ENST00000640552 MRPL37Q9BZE1 423 aaKnown RBP11.71□□□□□ -0.53
GFAP-237ENST00000640552 SLC25A15Q9Y619 301 aa11.71□□□□□ -0.53
GFAP-237ENST00000640552 H3BQ15 152 aa11.71□□□□□ -0.54
GFAP-237ENST00000640552 REG1BP48304 166 aa11.71□□□□□ -0.54
GFAP-237ENST00000640552 ERVK-16P61578 105 aa11.71□□□□□ -0.54
GFAP-237ENST00000640552 GCSAMQ8N6F7 178 aa11.71□□□□□ -0.54
GFAP-237ENST00000640552 IGKV1D-17A0A075B6S4 117 aa11.71□□□□□ -0.54
GFAP-237ENST00000640552 MARCH11A6NNE9 402 aa11.71□□□□□ -0.54
GFAP-237ENST00000640552 NKX6-1P78426 367 aaPredicted RBP11.71□□□□□ -0.54
GFAP-237ENST00000640552 HFEQ30201 348 aa11.71□□□□□ -0.54
GFAP-237ENST00000640552 TMEM204Q9BSN7 226 aa11.71□□□□□ -0.54
GFAP-237ENST00000640552 KMT2EQ8IZD2 1858 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 COX5AP20674 150 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 HMGN3Q15651 99 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 C4orf17Q53FE4 359 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 PDZD11Q5EBL8 140 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 ODF3L1Q8IXM7 274 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 LFNGQ8NES3 379 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 PIEZO1Q92508 2521 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 MAP1LC3B2A6NCE7 125 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 FAM87AP0C7U9 286 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 RAB13P51153 203 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 MAP1LC3BQ9GZQ8 125 aa11.7□□□□□ -0.54
GFAP-237ENST00000640552 FLI1Q01543 452 aaPredicted RBP11.69□□□□□ -0.54
GFAP-237ENST00000640552 CST9LP1Q5W188 147 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 DHRS7BQ6IAN0 325 aaPredicted RBP11.69□□□□□ -0.54
GFAP-237ENST00000640552 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 RBMXL3Q8N7X1 1067 aaKnown RBP11.69□□□□□ -0.54
GFAP-237ENST00000640552 MEGF10Q96KG7 1140 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 S1PR3Q99500 378 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
GFAP-237ENST00000640552 MBNL3Q9NUK0 354 aaKnown RBP11.69□□□□□ -0.54
GFAP-237ENST00000640552 DUXBA0A1W2PPF3 345 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 CRYABP02511 175 aaKnown RBP11.69□□□□□ -0.54
GFAP-237ENST00000640552 CEACAM1P13688 526 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 HOXA1P49639 335 aaPredicted RBP11.69□□□□□ -0.54
GFAP-237ENST00000640552 TFF3Q07654 80 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 ADIRFQ15847 76 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 FFAR4Q5NUL3 377 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 ABHD12Q8N2K0 398 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 RAB39BQ96DA2 213 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 C5orf30Q96GV9 206 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 HCFC1P51610 2035 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 COL27A1Q8IZC6 1860 aaPredicted RBP11.69□□□□□ -0.54
GFAP-237ENST00000640552 TRGV8A0A0C4DH27 118 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 SLC31A2O15432 143 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 NQO2P16083 231 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 DLK1P80370 383 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 PRSS33Q8NF86 280 aa11.69□□□□□ -0.54
GFAP-237ENST00000640552 PATZ1Q9HBE1 687 aaKnown RBP11.69□□□□□ -0.54
GFAP-237ENST00000640552 MYOD1P15172 320 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 HNF1AP20823 631 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 ZNF880Q6PDB4 577 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 ZNF525Q8N782 197 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 DSCAMO60469 2012 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 LRRC30A6NM36 301 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 TNFSF4P23510 183 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 HAPLN4Q86UW8 402 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 SSMEM1Q8WWF3 244 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 EDARADDQ8WWZ3 215 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 IL22RA2Q969J5 263 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 POM121Q96HA1 1249 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 DYNLRB1Q9NP97 96 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 PRELID3BQ9Y3B1 194 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 TRAV3A0A0B4J244 114 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 A0A0U1RQK1 487 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 SCAF4O95104 1147 aaKnown RBP11.68□□□□□ -0.54
GFAP-237ENST00000640552 MMP9P14780 707 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 MZT1Q08AG7 82 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 GCSAMLQ5JQS6 135 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 SPSB3Q6PJ21 355 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 RCC1LQ96I51 464 aaKnown RBP11.68□□□□□ -0.54
GFAP-237ENST00000640552 BIN3Q9NQY0 253 aa11.68□□□□□ -0.54
GFAP-237ENST00000640552 TRBV6-6A0A0A6YYG2 114 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.67□□□□□ -0.54
GFAP-237ENST00000640552 J3QW42 95 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms