RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 RNF167Q9H6Y7 350 aa13.07□□□□□ -0.32
CACNA1A-259ENST00000638114 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.07□□□□□ -0.32
CACNA1A-259ENST00000638114 SLC35D1Q9NTN3 355 aa13.07□□□□□ -0.32
CACNA1A-259ENST00000638114 IGKV1D-8A0A087WSZ0 117 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 A0A1W2PN81 502 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 SPDEFO95238 335 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 CLEC2LP0C7M8 214 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 CD36P16671 472 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 CHRNA7P36544 502 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 EGFEM1PQ0D2K5 195 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 Q6ZS49 121 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 MINDY2Q8NBR6 621 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 OR5M8Q8NGP6 311 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 MYOZ3Q8TDC0 251 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 FLYWCH2Q96CP2 140 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 UBE2E2Q96LR5 201 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 OR5B12Q96R08 314 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 CENPOQ9BU64 300 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 ST6GALNAC5Q9BVH7 336 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 GNB4Q9HAV0 340 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 SDHAF2Q9NX18 166 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 GAB2Q9UQC2 676 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 VSIG4Q9Y279 399 aa13.06□□□□□ -0.32
CACNA1A-259ENST00000638114 K7EIL1 84 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 SLC25A17O43808 307 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 SCGNO76038 276 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 CA2P00918 260 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 RAB9AP51151 201 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 CRIP2P52943 208 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 TMEM267Q0VDI3 215 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 C19orf54Q5BKX5 351 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 HACD4Q5VWC8 232 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 PPP1R27Q86WC6 154 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 TCTEX1D1Q8N7M0 179 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 OR11H1Q8NG94 326 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 NUDCD2Q8WVJ2 157 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 FAM103A1Q9BTL3 118 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 TPSG1Q9NRR2 321 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 RHBDL2Q9NX52 303 aa13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 FOXA2Q9Y261 457 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-259ENST00000638114 WI2-2373I1.2A0A1W2PRP0 233 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 TMEM235A6NFC5 223 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 EGR2P11161 476 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 GNG2P59768 71 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 PITPNAQ00169 270 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 CBX3Q13185 183 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 KIAA0141Q14154 515 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 IDNKQ5T6J7 187 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 ZNF562Q6V9R5 426 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 H1FOOQ8IZA3 346 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 CASTOR1Q8WTX7 329 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 C5orf30Q96GV9 206 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 NUBP2Q9Y5Y2 271 aa13.04□□□□□ -0.32
CACNA1A-259ENST00000638114 J3QRK9 145 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 SOX15O60248 233 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 FHL3Q13643 280 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 RTL8BQ17RB0 113 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 ZNF260Q3ZCT1 412 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 ACTBL2Q562R1 376 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 UNQ5815/PRO19632Q6UWF5 114 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 BVESQ8NE79 360 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 GRPEL2Q8TAA5 225 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 ARPC1AQ92747 370 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 HARBI1Q96MB7 349 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 DCSTAMPQ9H295 470 aa13.03□□□□□ -0.32
CACNA1A-259ENST00000638114 I3L521 148 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 LGALS7P47929 136 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 LUMP51884 338 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 GNB1P62873 340 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 RUNX1Q01196 453 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 TAGLNQ01995 201 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 ZNF616Q08AN1 781 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 FXYD3Q14802 87 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 DEFB121Q5J5C9 76 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 C9orf66Q5T8R8 295 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 LFNGQ8NES3 379 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 OR1N2Q8NGR9 330 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 OR5H6Q8NGV6 325 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 ETV7Q9Y603 341 aa13.02□□□□□ -0.33
CACNA1A-259ENST00000638114 SEC14L6B5MCN3 397 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 SHOXO15266 292 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 SSX5O60225 188 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 IGLV2-23P01705 113 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 CTXN2P0C2S0 81 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 OR8U8P0C7N1 319 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 RRASP10301 218 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 NFYAP23511 347 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 SCAND1P57086 179 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 DGCR2P98153 550 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 TIMM50Q3ZCQ8 353 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 AKIRIN2Q53H80 203 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 PYHIN1Q6K0P9 492 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 SLC25A38Q96DW6 304 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 ADTRPQ96IZ2 230 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 VCX3AQ9NNX9 186 aa13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 ZMAT5Q9UDW3 170 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-259ENST00000638114 TRAV18A0A075B6X5 111 aa13□□□□□ -0.33
CACNA1A-259ENST00000638114 ARPC1BO15143 372 aaKnown RBP13□□□□□ -0.33
CACNA1A-259ENST00000638114 CNIH1O95406 144 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms