RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PUS1Q9Y606 427 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLN8-212ENST00000637083 LOC102723971A0A1B0GUV8 181 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 A8MXE2 369 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 K7EM74 188 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 SPRY3O43610 288 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 SOX15O60248 233 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 PTAFRP25105 342 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 TAGLN2P37802 199 aaKnown RBP10.1□□□□□ -0.79
CLN8-212ENST00000637083 PMS2P11Q13670 270 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 ICAM4Q14773 271 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 TMEM30BQ3MIR4 351 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 ZNF787Q6DD87 383 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 OR8G2PQ6IF36 304 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 CENPVQ7Z7K6 275 aaPredicted RBP10.1□□□□□ -0.79
CLN8-212ENST00000637083 HAPLN4Q86UW8 402 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 TVP23CQ96ET8 276 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 P2RX4Q99571 388 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 NIPSNAP3BQ9BS92 247 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 CISD1Q9NZ45 108 aaKnown RBP10.1□□□□□ -0.79
CLN8-212ENST00000637083 PIEZO1Q92508 2521 aa10.1□□□□□ -0.79
CLN8-212ENST00000637083 MARCH11A6NNE9 402 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 CEBPZOSA8MTT3 80 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 PRRG2O14669 202 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 NDUFA2O43678 99 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 DUTP33316 252 aaKnown RBP10.09□□□□□ -0.79
CLN8-212ENST00000637083 ERVK-16P61578 105 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 VHLLQ6RSH7 139 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 RBMS3Q6XE24 437 aaKnown RBP10.09□□□□□ -0.79
CLN8-212ENST00000637083 MRGPRGQ86SM5 289 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 ZNF429Q86V71 674 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 FAM222BQ8WU58 562 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 ITLN1Q8WWA0 313 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 HIST1H2BAQ96A08 127 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 R3HDM4Q96D70 268 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 C20orf24Q9BUV8 137 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 ESRP2Q9H6T0 727 aaKnown RBP10.09□□□□□ -0.79
CLN8-212ENST00000637083 ELOVL5Q9NYP7 299 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 A0A087WWC5 75 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 UBE2L5PA0A1B0GUS4 154 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 LINC00473A8K010 186 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 DEFB108AA8MXU0 73 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 B4DEV8 164 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 C17orf112F2Z3M2 114 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 TFF1P04155 84 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 IRF2P14316 349 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 HOXA1P49639 335 aaPredicted RBP10.09□□□□□ -0.79
CLN8-212ENST00000637083 EDDM3BP56851 147 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 GNB2P62879 340 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 TNFAIP6P98066 277 aaPredicted RBP10.09□□□□□ -0.79
CLN8-212ENST00000637083 MSMPQ1L6U9 139 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 SLC35E3Q7Z769 313 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 ZNF709Q8N972 641 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.09□□□□□ -0.79
CLN8-212ENST00000637083 NUP37Q8NFH4 326 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 DIRC2Q96SL1 478 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 FAM234AQ9H0X4 552 aa10.09□□□□□ -0.79
CLN8-212ENST00000637083 H3BQ15 152 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 IFNA4P05014 189 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 BCL2P10415 239 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 AKR1C3P42330 323 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 BRWD1-AS2P59051 145 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 PNRC1Q12796 327 aaPredicted RBP10.08□□□□□ -0.8
CLN8-212ENST00000637083 LTC4SQ16873 150 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 TMEM108Q6UXF1 575 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 OR52E5Q8NH55 327 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 OR4A16Q8NH70 328 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 S1PR3Q99500 378 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 SLC39A9Q9NUM3 307 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 CALYQ9NYX4 217 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 GNG13Q9P2W3 67 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 CLN8Q9UBY8 286 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 KLF2Q9Y5W3 355 aaPredicted RBP10.08□□□□□ -0.8
CLN8-212ENST00000637083 SPTBN2O15020 2390 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 BSNQ9UPA5 3926 aa10.08□□□□□ -0.8
CLN8-212ENST00000637083 IGHV3OR15-7A0A075B7D8 119 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 ZG16O60844 167 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 NDUFS6O75380 124 aaKnown RBP10.07□□□□□ -0.8
CLN8-212ENST00000637083 CD40P25942 277 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 MAS1LP35410 378 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 CEBPGP53567 150 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 HOXA4Q00056 320 aaPredicted RBP10.07□□□□□ -0.8
CLN8-212ENST00000637083 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 ETV3LQ6ZN32 361 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 RPRMLQ8N4K4 120 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 Q8TCH9 128 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 SDSLQ96GA7 329 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 RCC1LQ96I51 464 aaKnown RBP10.07□□□□□ -0.8
CLN8-212ENST00000637083 DCTN5Q9BTE1 182 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 ZNF665Q9H7R5 613 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 SIRT7Q9NRC8 400 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 VAX2Q9UIW0 290 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 INTS1Q8N201 2190 aaKnown RBP10.07□□□□□ -0.8
CLN8-212ENST00000637083 TRGV10A0A0A0MS01 117 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 MAP1LC3B2A6NCE7 125 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 CXorf65A6NEN9 183 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 M0R1X1 148 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 FCGR3BO75015 233 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 OR2C1O95371 312 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 NQO2P16083 231 aa10.07□□□□□ -0.8
CLN8-212ENST00000637083 BMP5P22003 454 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms