RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ZNF826PQ6ZT77 177 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 C2orf50Q96LR7 162 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 MAP1AP78559 2803 aaPredicted RBP9.72□□□□□ -0.85
CLN6-217ENST00000636964 TIMM8AO60220 97 aaPredicted RBP9.71□□□□□ -0.85
CLN6-217ENST00000636964 RPL12P30050 165 aaKnown RBP9.71□□□□□ -0.85
CLN6-217ENST00000636964 FCGR2CP31995 323 aa9.71□□□□□ -0.85
CLN6-217ENST00000636964 ST6GALNAC3Q8NDV1 305 aa9.71□□□□□ -0.85
CLN6-217ENST00000636964 SLC35B3Q9H1N7 401 aa9.71□□□□□ -0.85
CLN6-217ENST00000636964 ARV1Q9H2C2 271 aa9.71□□□□□ -0.85
CLN6-217ENST00000636964 NECAP2Q9NVZ3 263 aa9.71□□□□□ -0.85
CLN6-217ENST00000636964 LOC102724200A0A096LPH7 203 aaPredicted RBP9.71□□□□□ -0.86
CLN6-217ENST00000636964 IQCF6A8MYZ5 107 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 PRRG2O14669 202 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 MLNRO43193 412 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 IGLV1-44P01699 117 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 SUMF2Q8NBJ7 301 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 OR2D3Q8NGH3 330 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 FRZBQ92765 325 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 TMEM56Q96MV1 263 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 ZNF286AQ9HBT8 521 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 DUSP13Q9UII6 198 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 TMEM56-RWDD3S4R434 201 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 A0A1B0GV72 72 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 CEACAM18A8MTB9 384 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 J3QT63 122 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 CRYGCP07315 174 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 HIST1H2BLQ99880 126 aa9.71□□□□□ -0.86
CLN6-217ENST00000636964 TRAV39A0A0B4J263 110 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 TAAR5O14804 337 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 TRGC1P0CF51 173 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 Q6ZR03 302 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 LRP11Q86VZ4 500 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 RAB39BQ96DA2 213 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 A0A1B0GW15 77 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 ZNF705GA8MUZ8 300 aaPredicted RBP9.7□□□□□ -0.86
CLN6-217ENST00000636964 SIRPB1O00241 398 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 GAPDHP04406 335 aaKnown RBP9.7□□□□□ -0.86
CLN6-217ENST00000636964 SCTP09683 121 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 RPL29P47914 159 aaKnown RBP9.7□□□□□ -0.86
CLN6-217ENST00000636964 TAS2R31P59538 309 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 MSMPQ1L6U9 139 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 TMEM211Q6ICI0 200 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 EIF5AL1Q6IS14 154 aaKnown RBP9.7□□□□□ -0.86
CLN6-217ENST00000636964 C20orf204Q6ZNR8 217 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 OR8G5Q8NG78 346 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 CNTNAP3Q9BZ76 1288 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 PKIBQ9C010 78 aa9.7□□□□□ -0.86
CLN6-217ENST00000636964 C14orf166Q9Y224 244 aaKnown RBP9.7□□□□□ -0.86
CLN6-217ENST00000636964 TRAV24A0A0B4J272 114 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 A0A0G2JNJ9 132 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 LRP5LA4QPB2 252 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 TRDCB7Z8K6 153 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 RBMXL2O75526 392 aaKnown RBP9.69□□□□□ -0.86
CLN6-217ENST00000636964 TFF1P04155 84 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 SELENOTP62341 195 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 ZNF718Q3SXZ3 478 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 LYG1Q8N1E2 194 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 SCGB3A2Q96PL1 93 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 SLC25A31Q9H0C2 315 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 Q9UFV3 132 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 ZFP30Q9Y2G7 519 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 WNT9BO14905 357 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 DEGS1O15121 323 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 CCL25O15444 150 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 GZMBP10144 247 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 MPV17LQ2QL34 196 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 PHLDA2Q53GA4 152 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 OR5R1Q8NH85 324 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 DPF1Q92782 380 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 ABHD14AQ9BUJ0 271 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 KCNJ16Q9NPI9 418 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A10PA6NDY2 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A18PA6NE21 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A16PA6NEW6 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A20PA6NIJ5 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A8PA6NJQ4 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A7PA6NKC0 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A22PA8MWA6 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A12PA8MX19 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A5PA8MXJ8 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A23PA8MXZ1 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 H3BQ15 152 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 HSD17B6O14756 317 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 PPP1R2P9O14990 202 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 DEDDO75618 318 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A15PP0C7V4 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A13PP0C7W8 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A14PP0C7W9 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 FAM90A24PP0C7X0 464 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 CEACAM3P40198 252 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 TIMM23BQ5SRD1 257 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 BTNL3Q6UXE8 466 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 OR10W1Q8NGF6 305 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 SFXN3Q9BWM7 321 aa9.69□□□□□ -0.86
CLN6-217ENST00000636964 K7EPK0 472 aa9.68□□□□□ -0.86
CLN6-217ENST00000636964 JTBO76095 146 aa9.68□□□□□ -0.86
CLN6-217ENST00000636964 SP6Q3SY56 376 aa9.68□□□□□ -0.86
CLN6-217ENST00000636964 FAM71E2Q8N5Q1 922 aa9.68□□□□□ -0.86
CLN6-217ENST00000636964 UBALD1Q8TB05 177 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms