RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 FOLR3P41439 243 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 GFRA1P56159 465 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 C9orf135Q5VTT2 229 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 OR1L1Q8NH94 360 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 TMEM208Q9BTX3 173 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 KCNIP1Q9NZI2 227 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 POLDIP2Q9Y2S7 368 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 A0A1W2PR80 420 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 SIRPB1O00241 398 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 ZG16O60844 167 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 RHBDL1O75783 438 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 CLDN14O95500 239 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 IGHEP01854 428 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 TEX43Q6ZNM6 134 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 CNTRLQ7Z7A1 2325 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 SDSLQ96GA7 329 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 OR51B6Q9H340 312 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 ZDHHC11Q9H8X9 412 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 PARD6AQ9NPB6 346 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 A0A1W2PPV4 95 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 LINC00614P0C842 121 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 ADMP35318 185 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 PCP4P48539 62 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 TOMM20LQ6UXN7 152 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 RTL8AQ9BWD3 113 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 NUPR1O60356 82 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 YPEL1O60688 119 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 RAMP3O60896 148 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 C1QTNF9P0C862 333 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 ATP5G3P48201 142 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 YPEL2Q96QA6 119 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 PLA2G3Q9NZ20 509 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 WDR83OSQ9Y284 106 aa12.44□□□□□ -0.42
CACNA1A-220ENST00000635988 SH2D1BO14796 132 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 MPDU1O75352 247 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 CRYAAP02489 173 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 WNT5AP41221 380 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 ZNF816Q0VGE8 651 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 H2BFWTQ7Z2G1 175 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 ZNHIT1O43257 154 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 CA6P23280 308 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 PLA2G5P39877 138 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 HLA-BQ31612 363 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 SPEM1Q8N4L4 309 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 OR10G8Q8NGN5 311 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 SVIPQ8NHG7 77 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 SAP25Q8TEE9 199 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 GALMQ96C23 342 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 OR2D2Q9H210 308 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 IL17BQ9UHF5 180 aa12.43□□□□□ -0.42
CACNA1A-220ENST00000635988 ZNF503-AS2A6NEH8 195 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 IFNL4K9M1U5 179 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 GDF9O60383 454 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 S1PR2O95136 353 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 UBE2G2P60604 165 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 ERVK11-1P61568 191 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 ZNF146Q15072 292 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 UBALD1Q8TB05 177 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 TAAR6Q96RI8 345 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 BOKQ9UMX3 212 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 SDK2Q58EX2 2172 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 A0A1B0GUS0 222 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 RBMXL2O75526 392 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 CRISP2P16562 243 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 EGR1P18146 543 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 CD82P27701 267 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 CD1BP29016 333 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 TIMP3P35625 211 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 TPTE2P1Q5T6R2 138 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 WDR31Q8NA23 367 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 ZDHHC16Q969W1 377 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 DERL1Q9BUN8 251 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 VAMP8Q9BV40 100 aa12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-220ENST00000635988 BRWD1Q9NSI6 2320 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 TNFSF10P50591 281 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 RPL30P62888 115 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 Q6ZWC4 215 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 TUSC5Q8IXB3 177 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 OR5AU1Q8NGC0 362 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 APH1AQ96BI3 265 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 TMEM204Q9BSN7 226 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 PATZ1Q9HBE1 687 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 DEPPQ9NTK1 212 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 VCANP13611 3396 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 TMEM30CPA0ZSE6 113 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 RBFOX2O43251 390 aaKnown RBP eCLIP12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 IRF2P14316 349 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 CYB561P49447 251 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 RPP30P78346 268 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 ZNF90Q03938 601 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 TRA2AQ13595 282 aaKnown RBP eCLIP12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 TCF23Q7RTU1 214 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 Q8N7P7 452 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 ZNF114Q8NC26 417 aa12.41□□□□□ -0.42
CACNA1A-220ENST00000635988 NINJ1Q92982 152 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms