RNA–Protein interactions for RNA: ENST00000635914.1

UBE3A-224, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 9,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-224ENST00000635914 FOXD3Q9UJU5 478 aaPredicted RBP12.06□□□□□ -0.48
UBE3A-224ENST00000635914 APELAP0DMC3 54 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 ISXQ2M1V0 245 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 RPL36A-HNRNPH2H7BZ11 118 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 CEACAM4O75871 244 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 LEPROTL1O95214 131 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 SOD3P08294 240 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 RPL27AP46776 148 aaKnown RBP12.06□□□□□ -0.48
UBE3A-224ENST00000635914 AHRRA9YTQ3 701 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 MEF2BQ02080 365 aaPredicted RBP12.06□□□□□ -0.48
UBE3A-224ENST00000635914 TMEM177Q53S58 311 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 SEZ6L2Q6UXD5 910 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 IGHV4-34P06331 123 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 FGF11Q92914 225 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 MRPL32Q9BYC8 188 aaKnown RBP12.06□□□□□ -0.48
UBE3A-224ENST00000635914 TNFSF18Q9UNG2 199 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 B4E171 279 aa12.06□□□□□ -0.48
UBE3A-224ENST00000635914 SEC11BP0C7V7 166 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 COL10A1Q03692 680 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 TSPO2Q5TGU0 170 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 PCSK4Q6UW60 755 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 OR8G5Q8NG78 346 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 SHISA8B8ZZ34 492 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 SIGLEC14Q08ET2 396 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 CFAP161Q6P656 301 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 PRDM7Q9NQW5 492 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 IGHV3OR16-12A0A075B7B8 117 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 ATP5J2P56134 94 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 SHISA4Q96DD7 197 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 LY75O60449 1722 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 CNTFRP26992 372 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 ZNF137PP52743 207 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 ADRA2AP08913 450 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 MEF2CQ06413 473 aaPredicted RBP12.05□□□□□ -0.48
UBE3A-224ENST00000635914 NEUROG1Q92886 237 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 CCL27Q9Y4X3 112 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
UBE3A-224ENST00000635914 PRR33A8MZF0 331 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 FAM90A26D6RGX4 464 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 ASAH2BP0C7U1 165 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 PDLIM4P50479 330 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 PXMP4Q9Y6I8 212 aa12.05□□□□□ -0.48
UBE3A-224ENST00000635914 PPM1DO15297 605 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 SELENOPP49908 381 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 FAM169BQ8N8A8 192 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 H3BMH7 237 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 WIPI2Q9Y4P8 454 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 LIPFP07098 398 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 LINC00469Q8N7U9 141 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 SOX21Q9Y651 276 aaPredicted RBP12.04□□□□□ -0.48
UBE3A-224ENST00000635914 OBSL1O75147 1896 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 FOXH1O75593 365 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 SMIM13P0DJ93 91 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 PSG6Q00889 435 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 METTL1Q9UBP6 276 aaKnown RBP12.04□□□□□ -0.48
UBE3A-224ENST00000635914 GDF9O60383 454 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 CTSVO60911 334 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 RBM11P57052 281 aaKnown RBP12.04□□□□□ -0.48
UBE3A-224ENST00000635914 FHL5Q5TD97 284 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 HSF4Q9ULV5 492 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 PAGE4O60829 102 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 PAX1P15863 534 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 NPBWR2P48146 333 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 NXPH1P58417 271 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 PRSS53Q2L4Q9 553 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 TMEM179BQ7Z7N9 219 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 HIST1H1AQ02539 215 aaPredicted RBP12.04□□□□□ -0.48
UBE3A-224ENST00000635914 MESTQ5EB52 335 aa12.04□□□□□ -0.48
UBE3A-224ENST00000635914 SLIRPQ9GZT3 109 aaKnown RBP12.04□□□□□ -0.48
UBE3A-224ENST00000635914 CYB5R3P00387 301 aaPredicted RBP12.03□□□□□ -0.48
UBE3A-224ENST00000635914 CEACAM21Q3KPI0 293 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 SLC25A34Q6PIV7 304 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 DUSP15Q9H1R2 295 aaPredicted RBP12.03□□□□□ -0.48
UBE3A-224ENST00000635914 TRAV39A0A0B4J263 110 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 A0A1B0GW15 77 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
UBE3A-224ENST00000635914 OR13C6PQ8NH95 151 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 SFRP2Q96HF1 295 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 RNF115Q9Y4L5 304 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 NCOA6Q14686 2063 aaPredicted RBP12.03□□□□□ -0.48
UBE3A-224ENST00000635914 LNP1A1A4G5 178 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 NKG7Q16617 165 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 HIKESHIQ53FT3 197 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 KIR3DL3Q8N743 410 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 DNASE2BQ8WZ79 361 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 LOXL4Q96JB6 756 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 SFXN3Q9BWM7 321 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 AICDAQ9GZX7 198 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.03□□□□□ -0.48
UBE3A-224ENST00000635914 LINC00869P0C866 280 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 PSG2P11465 335 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 GCSAMLQ5JQS6 135 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 IGHV3OR15-7A0A075B7D8 119 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 SAPCD1Q5SSQ6 148 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 SH2D5Q6ZV89 423 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 SDF2L1Q9HCN8 221 aa12.03□□□□□ -0.48
UBE3A-224ENST00000635914 TINAGQ9UJW2 476 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms