RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 LOXP28300 417 aaPredicted RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 G6PCP35575 357 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 THBS3P49746 956 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 YLPM1P49750 1951 aaKnown RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 ADORA2A-AS1P86434 159 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 TNFRSF9Q07011 255 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 ATMQ13315 3056 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 IZUMO4Q1ZYL8 232 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 PDLIM3Q53GG5 364 aaPredicted RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 ADAM5Q6NVV9 412 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 TMEM14EPQ6UXP3 125 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 DPPA3Q6W0C5 159 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 TCF23Q7RTU1 214 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 H2BFWTQ7Z2G1 175 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 CENPVQ7Z7K6 275 aaPredicted RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 TGIF2LYQ8IUE0 185 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 ZCCHC24Q8N2G6 241 aaKnown RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 C8orf31Q8N9H6 132 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 LINC01560Q8TB33 94 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 ZNF596Q8TC21 504 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 DCHS1Q96JQ0 3298 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 CIB3Q96Q77 187 aaPredicted RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 SPENQ96T58 3664 aaKnown RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 S1PR3Q99500 378 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 ATP5SQ99766 215 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 ZNF251Q9BRH9 671 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 SCRT1Q9BWW7 348 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 IFI27L2Q9H2X8 130 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 HRH4Q9H3N8 390 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 RBKSQ9H477 322 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 SMDT1Q9H4I9 107 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 NARFLQ9H6Q4 476 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 SAP30LQ9HAJ7 183 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 KCNJ16Q9NPI9 418 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 TMEM106BQ9NUM4 274 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 UQCC1Q9NVA1 299 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 CISD1Q9NZ45 108 aaKnown RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 RPUSD1Q9UJJ7 312 aaKnown RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 PRELID3BQ9Y3B1 194 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 DOCK11Q5JSL3 2073 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 BTBD17A6NE02 478 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 PMS2P5A8MQ11 134 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 B8ZZF3 427 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 M0R1X1 148 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 DLL1O00548 723 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 TMPRSS2O15393 492 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 PPIHO43447 177 aaKnown RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 NDUFB3O43676 98 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 FCGR3BO75015 233 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 TSPAN15O95858 294 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 IL6RP08887 468 aaPredicted RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 C1QTNF9P0C862 333 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 SELLP14151 372 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 DAOP14920 347 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 NQO2P16083 231 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 SNCAP37840 140 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 ID4P47928 161 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 CAMLGP49069 296 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 DVL1P1P54792 670 aaPredicted RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 SPCS3P61009 180 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 GNB2P62879 340 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 HBG1P69891 147 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 HBG2P69892 147 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 MRPS11P82912 194 aaKnown RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 SERF2P84101 59 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 TAGLNQ01995 201 aaKnown RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 ARL16Q0P5N6 197 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 ZNF816Q0VGE8 651 aaPredicted RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 CLINT1Q14677 625 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 PEA15Q15121 130 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 POU2AF1Q16633 256 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 LTC4SQ16873 150 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 LRRC75BQ2VPJ9 315 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 ZNF672Q499Z4 452 aaPredicted RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 TMEM200BQ69YZ2 307 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 DUX4L9Q6RFH8 374 aaPredicted RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 BTNL3Q6UXE8 466 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 HEPN1Q6WQI6 88 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 Q6ZRG5 221 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 C1orf229Q6ZS94 237 aaPredicted RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 SLC25A48Q6ZT89 311 aaKnown RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 HAPLN4Q86UW8 402 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 PUSL1Q8N0Z8 303 aaKnown RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 LINC00311Q8N616 119 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 ZNF525Q8N782 197 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 FAM216BQ8N7L0 139 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 HSD17B11Q8NBQ5 300 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 LFNGQ8NES3 379 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 OR2G3Q8NGZ4 309 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 SCGB1C1Q8TD33 95 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 CCL17Q92583 94 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 NEUROG1Q92886 237 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 R3HDM4Q96D70 268 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 AIFM2Q9BRQ8 373 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 PSMG3Q9BT73 122 aaPredicted RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 ABHD14AQ9BUJ0 271 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 SEC11CQ9BY50 192 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 GAL3ST2Q9H3Q3 398 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 DYNLRB1Q9NP97 96 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 C19orf12Q9NSK7 152 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms