RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 CNTFRP26992 372 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 GABRA3P34903 492 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 GUCA1AP43080 201 aaPredicted RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 MARCKSL1P49006 195 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 UBE2E1P51965 193 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 POLR2HP52434 150 aaKnown RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 AKR1C2P52895 323 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 APOC4P55056 127 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 TMBIM6P55061 237 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 LYZP61626 148 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 DCDP81605 110 aaKnown RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 MEF2BQ02080 365 aaPredicted RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 HSD52Q0P140 79 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 PMAIP1Q13794 54 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 LAGE3Q14657 143 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 JOSD1Q15040 202 aaPredicted RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 PAFAH1B3Q15102 231 aaKnown RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 RAB35Q15286 201 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 BATFQ16520 125 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 NRF1Q16656 503 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 IQCJQ1A5X6 159 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 CEACAM16Q2WEN9 425 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 MESTQ5EB52 335 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 SPANXN3Q5MJ09 141 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 OR2T5Q6IEZ7 315 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 RASL11AQ6T310 242 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 GLIPR1L1Q6UWM5 242 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 Q6ZSR6 202 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 Q6ZVH6 145 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 NEGR1Q7Z3B1 354 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 PPP1R27Q86WC6 154 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 TMEM86AQ8N2M4 240 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF664Q8N3J9 261 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 FAM71E2Q8N5Q1 922 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 SLC35G3Q8N808 338 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 TMEM229BQ8NBD8 167 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 GPR26Q8NDV2 337 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 OR11H6Q8NGC7 330 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 OR51A4Q8NGJ6 313 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 OR10D4PQ8NGN7 298 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 OR5AR1Q8NGP9 310 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 OR2T29Q8NH02 315 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 PIFOQ8TCI5 191 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 MALSU1Q96EH3 234 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 TMEM101Q96IK0 257 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 BTN2A3PQ96KV6 586 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 BMFQ96LC9 184 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 UBE2E2Q96LR5 201 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 RDH12Q96NR8 316 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 LYSMD1Q96S90 227 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 KIR2DL4Q99706 377 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 KCTD14Q9BQ13 255 aaPredicted RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 MRPL45Q9BRJ2 306 aaKnown RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF670Q9BS34 389 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 DERL1Q9BUN8 251 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 OR8D2Q9GZM6 311 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 RNASE7Q9H1E1 156 aaKnown RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 OR52D1Q9H346 318 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 ISG20L2Q9H9L3 353 aaKnown RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 PRTFDC1Q9NRG1 225 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 CBLN4Q9NTU7 201 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 TAS2R5Q9NYW4 299 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 MRPL27Q9P0M9 148 aaKnown RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 SOX21Q9Y651 276 aaPredicted RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 CHD2O14647 1828 aaKnown RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 TRPM1Q7Z4N2 1603 aa2.23□□□□□ -2.05
CNOT1-223ENST00000628857 BAZ2AQ9UIF9 1905 aaKnown RBP2.23□□□□□ -2.05
CNOT1-223ENST00000628857 KNDC1Q76NI1 1749 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 UGGT2Q9NYU1 1516 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 MYOM2P54296 1465 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 MAGI2Q86UL8 1455 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 KIF14Q15058 1648 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PREX2Q70Z35 1606 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 IGHV3OR16-12A0A075B7B8 117 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 A0A0G2JMM0 328 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 LOC100130705A0A1B0GUX0 176 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 SPAARA0A1B0GVQ0 90 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 A0A1W2PPB8 328 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 MEIS3P1A6NDR6 274 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 BTNL10A8MVZ5 291 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF705EA8MWA4 302 aaPredicted RBP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 KIR3DP1A8MWS1 328 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 OR2T1O43869 369 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 MRPS14O60783 128 aaKnown RBP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 LYPD3O95274 346 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 LGALS2P05162 132 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 FGF1P05230 155 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 CSN2P05814 226 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 SOD3P08294 240 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 OR4Q2P0C623 313 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 CPMP14384 443 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 CXCL3P19876 107 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 KLK2P20151 261 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 RPL29P47914 159 aaKnown RBP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 LHX2P50458 406 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 FABP6P51161 128 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 SUB1P53999 127 aaKnown RBP eCLIP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 CTBP2P56545 445 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 UBA52P62987 128 aaKnown RBP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 SLC35A1P78382 337 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms