RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 DAOP14920 347 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 CEACAM16Q2WEN9 425 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 FOXL2NBQ6ZUU3 175 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 LHFPL1Q86WI0 220 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 SMIM12Q96EX1 92 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 C14orf144Q96I85 54 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 RNF126Q9BV68 326 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 TM2D1Q9BX74 207 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 PECRQ9BY49 303 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.76□□□□□ -0.85
LINC00538-201ENST00000626109 TMEM100Q9NV29 134 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 C1orf123Q9NWV4 160 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 SLC7A11Q9UPY5 501 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 KALRNO60229 2985 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 IGKV1-9A0A0C4DH69 117 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 ATG12O94817 140 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 SFTPBP07988 381 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 CD79AP11912 226 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 RBMXP38159 391 aaKnown RBP9.76□□□□□ -0.85
LINC00538-201ENST00000626109 C19orf54Q5BKX5 351 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 WDR25Q64LD2 544 aaPredicted RBP9.76□□□□□ -0.85
LINC00538-201ENST00000626109 DRAM2Q6UX65 266 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 Q6ZSR3 168 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 ZSCAN4Q8NAM6 433 aaPredicted RBP9.76□□□□□ -0.85
LINC00538-201ENST00000626109 OR52H1Q8NGJ2 320 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 OR1S2Q8NGQ3 325 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 MOB3AQ96BX8 217 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 AQP10Q96PS8 301 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 RTBDNQ9BSG5 229 aaPredicted RBP9.76□□□□□ -0.85
LINC00538-201ENST00000626109 CHST5Q9GZS9 411 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 ESPL1Q14674 2120 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 TMEM218A2RU14 115 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 DHRS7CA6NNS2 312 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 ZG16O60844 167 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 PLA2G2AP14555 144 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 SERPINA2P20848 420 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 TGFBR3Q03167 851 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 P2RY6Q15077 328 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 PDZD11Q5EBL8 140 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 C9orf135Q5VTT2 229 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 ZNF474Q6S9Z5 364 aaPredicted RBP9.75□□□□□ -0.85
LINC00538-201ENST00000626109 IL34Q6ZMJ4 242 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 OR13G1Q8NGZ3 307 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 LYPD6BQ8NI32 183 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 TMEM230Q96A57 120 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 RAB39BQ96DA2 213 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 SFRP2Q96HF1 295 aa9.75□□□□□ -0.85
LINC00538-201ENST00000626109 ELL3Q9HB65 397 aaPredicted RBP9.75□□□□□ -0.85
LINC00538-201ENST00000626109 TSTD3H0UI37 97 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 J3QKU1 62 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 M0R135 149 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 TSPAN13O95857 204 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 DBHP09172 617 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 TMEM225BP0DP42 221 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 SCGB1A1P11684 91 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 COX5AP20674 150 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 IGHV1-2P23083 117 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 HIST1H3AP68431 136 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 NHLH2Q02577 135 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 HIST2H3PS2Q5TEC6 136 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 AADACL3Q5VUY0 350 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 HIST2H3AQ71DI3 136 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 SGPP2Q8IWX5 399 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 ZNF837Q96EG3 531 aaPredicted RBP9.74□□□□□ -0.85
LINC00538-201ENST00000626109 ZNF799Q96GE5 643 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 LYZL4Q96KX0 146 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 MMP26Q9NRE1 261 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 ELOVL5Q9NYP7 299 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 GNG12Q9UBI6 72 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 RP1L1Q8IWN7 2480 aaPredicted RBP9.74□□□□□ -0.85
LINC00538-201ENST00000626109 CFAP46Q8IYW2 2715 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 A0A1W2PP11 408 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 FOXI3A8MTJ6 420 aaPredicted RBP9.74□□□□□ -0.85
LINC00538-201ENST00000626109 F5H768 121 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 DNASE2O00115 360 aaPredicted RBP9.74□□□□□ -0.85
LINC00538-201ENST00000626109 HSBP1O75506 76 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 LYZL6O75951 148 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 IFNA4P05014 189 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 S100A8P05109 93 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 FOXG1P55316 489 aaPredicted RBP9.74□□□□□ -0.85
LINC00538-201ENST00000626109 ENDOGQ14249 297 aaKnown RBP9.74□□□□□ -0.85
LINC00538-201ENST00000626109 UBE2V2Q15819 145 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 OR2B11Q5JQS5 317 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 SPNS3Q6ZMD2 512 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 LFNGQ8NES3 379 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 OR2AE1Q8NHA4 323 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 ITLN2Q8WWU7 325 aaPredicted RBP9.74□□□□□ -0.85
LINC00538-201ENST00000626109 TIMD4Q96H15 378 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 KCNJ16Q9NPI9 418 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 TMEM38BQ9NVV0 291 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 ZNF391Q9UJN7 358 aa9.74□□□□□ -0.85
LINC00538-201ENST00000626109 SDCBPO00560 298 aaPredicted RBP9.73□□□□□ -0.85
LINC00538-201ENST00000626109 ENSAO43768 121 aaKnown RBP9.73□□□□□ -0.85
LINC00538-201ENST00000626109 CLDN14O95500 239 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 GNRHRP30968 328 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 PDLIM4P50479 330 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 SUPT4H1P63272 117 aaKnown RBP9.73□□□□□ -0.85
LINC00538-201ENST00000626109 PSG5Q15238 335 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 POU2AF1Q16633 256 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 PABPC1L2AQ5JQF8 200 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms