RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 DUX3Q96PT4 197 aa11.56□□□□□ -0.56
LINC00643-206ENST00000623985 SLC35D1Q9NTN3 355 aa11.56□□□□□ -0.56
LINC00643-206ENST00000623985 SDHAF2Q9NX18 166 aa11.56□□□□□ -0.56
LINC00643-206ENST00000623985 RHBDL2Q9NX52 303 aa11.56□□□□□ -0.56
LINC00643-206ENST00000623985 METTL1Q9UBP6 276 aaKnown RBP11.56□□□□□ -0.56
LINC00643-206ENST00000623985 ELF5Q9UKW6 265 aaPredicted RBP11.56□□□□□ -0.56
LINC00643-206ENST00000623985 FBXO7Q9Y3I1 522 aa11.56□□□□□ -0.56
LINC00643-206ENST00000623985 ETV7Q9Y603 341 aa11.56□□□□□ -0.56
LINC00643-206ENST00000623985 TNCP24821 2201 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 RAB25P57735 213 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 CX3CL1P78423 397 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 TAGLNQ01995 201 aaKnown RBP11.55□□□□□ -0.56
LINC00643-206ENST00000623985 CBX3Q13185 183 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 FHL3Q13643 280 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 PSG5Q15238 335 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 TIMM50Q3ZCQ8 353 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 CDNFQ49AH0 187 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 H1FOOQ8IZA3 346 aaPredicted RBP11.55□□□□□ -0.56
LINC00643-206ENST00000623985 OR5M8Q8NGP6 311 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 FLYWCH2Q96CP2 140 aaKnown RBP11.55□□□□□ -0.56
LINC00643-206ENST00000623985 DCSTAMPQ9H295 470 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 RNF167Q9H6Y7 350 aa11.55□□□□□ -0.56
LINC00643-206ENST00000623985 FOXA2Q9Y261 457 aaPredicted RBP11.55□□□□□ -0.56
LINC00643-206ENST00000623985 RBM7Q9Y580 266 aaKnown RBP11.55□□□□□ -0.56
LINC00643-206ENST00000623985 IGKV1D-8A0A087WSZ0 117 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 A0A1W2PN81 502 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 TMEM235A6NFC5 223 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 TMEM127O75204 238 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 CA2P00918 260 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 HOXD3P31249 432 aaPredicted RBP11.54□□□□□ -0.56
LINC00643-206ENST00000623985 CHRNA7P36544 502 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 LINC00205P59089 165 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 GNG2P59768 71 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
LINC00643-206ENST00000623985 RUNX1Q01196 453 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 TMEM267Q0VDI3 215 aaPredicted RBP11.54□□□□□ -0.56
LINC00643-206ENST00000623985 ZNF260Q3ZCT1 412 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 PYHIN1Q6K0P9 492 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 ZNF491Q8N8L2 437 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 ABHD5Q8WTS1 349 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 NUDCD2Q8WVJ2 157 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 C5orf30Q96GV9 206 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 KLK15Q9H2R5 256 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 VSIG4Q9Y279 399 aa11.54□□□□□ -0.56
LINC00643-206ENST00000623985 A0A0A6YYH2 397 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 A6NJ64 397 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 FCN1O00602 326 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 SLC25A17O43808 307 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 TNFAIP8O95379 198 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 CTXN2P0C2S0 81 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 CLEC2LP0C7M8 214 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 RRASP10301 218 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 RAB9AP51151 201 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 KRTAP10-11P60412 298 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 RTL8BQ17RB0 113 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 ZNF562Q6V9R5 426 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 OR11H1Q8NG94 326 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 ARPC1AQ92747 370 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 SLC25A38Q96DW6 304 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 ADTRPQ96IZ2 230 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 HARBI1Q96MB7 349 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 GNB4Q9HAV0 340 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 VCX3AQ9NNX9 186 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 TPSG1Q9NRR2 321 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 NUBP2Q9Y5Y2 271 aa11.53□□□□□ -0.56
LINC00643-206ENST00000623985 I3L521 148 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 SOX15O60248 233 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 OR8U8P0C7N1 319 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 EGR2P11161 476 aaPredicted RBP11.52□□□□□ -0.57
LINC00643-206ENST00000623985 LGALS7P47929 136 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 KIAA0141Q14154 515 aaPredicted RBP11.52□□□□□ -0.57
LINC00643-206ENST00000623985 AKIRIN2Q53H80 203 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 ACTBL2Q562R1 376 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 IDNKQ5T6J7 187 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 PPP1R27Q86WC6 154 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 ZNF645Q8N7E2 425 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 OR5H6Q8NGV6 325 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 CLCC1Q96S66 551 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 FAM103A1Q9BTL3 118 aaKnown RBP11.52□□□□□ -0.57
LINC00643-206ENST00000623985 ST6GALNAC5Q9BVH7 336 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 ZMAT5Q9UDW3 170 aaKnown RBP11.52□□□□□ -0.57
LINC00643-206ENST00000623985 A3GALT2U3KPV4 340 aa11.52□□□□□ -0.57
LINC00643-206ENST00000623985 A0A087WXM4 84 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 K7EIL1 84 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 SSX5O60225 188 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 IGLV2-23P01705 113 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 DUTP33316 252 aaKnown RBP11.51□□□□□ -0.57
LINC00643-206ENST00000623985 ZNF616Q08AN1 781 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 TMEM177Q53S58 311 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 C9orf66Q5T8R8 295 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 CNIH2Q6PI25 160 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 UNQ5815/PRO19632Q6UWF5 114 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 CROCCP3Q8IVE0 287 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 TSPAN14Q8NG11 270 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 DDB2Q92466 427 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 ANXA10Q9UJ72 324 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 SPATA2Q9UM82 520 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 OR2W1Q9Y3N9 320 aa11.51□□□□□ -0.57
LINC00643-206ENST00000623985 LINC00473A8K010 186 aa11.5□□□□□ -0.57
LINC00643-206ENST00000623985 SHOXO15266 292 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms