RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 TFF3Q07654 80 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 FFAR4Q5NUL3 377 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 COLCA1Q6ZS62 124 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 FAM58AQ8N1B3 248 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 TRAPPC2LQ9UL33 140 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 IGF2RP11717 2491 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 LOC102723996A0A087X1L8 192 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 A0A0U1RQK1 487 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 DEGS1O15121 323 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 NPPCP23582 126 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 GDF1P27539 372 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 SRD5A2P31213 254 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 G6PCP35575 357 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 CEACAM6P40199 344 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 ZNF816Q0VGE8 651 aaPredicted RBP10.97□□□□□ -0.65
PSME3-217ENST00000622892 SH2D2AQ9NP31 389 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 DEPPQ9NTK1 212 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 OR6C3Q9NZP0 311 aa10.97□□□□□ -0.65
PSME3-217ENST00000622892 ZNF320A2RRD8 509 aa10.96□□□□□ -0.65
PSME3-217ENST00000622892 HNF1AP20823 631 aa10.96□□□□□ -0.65
PSME3-217ENST00000622892 CA6P23280 308 aa10.96□□□□□ -0.65
PSME3-217ENST00000622892 TNFRSF9Q07011 255 aa10.96□□□□□ -0.65
PSME3-217ENST00000622892 LBHQ53QV2 105 aaPredicted RBP10.96□□□□□ -0.65
PSME3-217ENST00000622892 COA6Q5JTJ3 125 aaKnown RBP10.96□□□□□ -0.65
PSME3-217ENST00000622892 ZNF808Q8N4W9 903 aaPredicted RBP10.96□□□□□ -0.65
PSME3-217ENST00000622892 DERL1Q9BUN8 251 aa10.96□□□□□ -0.65
PSME3-217ENST00000622892 PCSK5Q92824 1860 aa10.96□□□□□ -0.65
PSME3-217ENST00000622892 PINLYPA6NC86 204 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 RBMXL2O75526 392 aaKnown RBP10.96□□□□□ -0.66
PSME3-217ENST00000622892 SLC25A6P12236 298 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 LINC00205P59089 165 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 SRSF7Q16629 238 aaKnown RBP eCLIP10.96□□□□□ -0.66
PSME3-217ENST00000622892 GCSAMLQ5JQS6 135 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 RIPPLY2Q5TAB7 128 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 ASCL5Q7RTU5 278 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 TGIF2LYQ8IUE0 185 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 LSM10Q969L4 123 aaKnown RBP10.96□□□□□ -0.66
PSME3-217ENST00000622892 ZDHHC16Q969W1 377 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 TMEM204Q9BSN7 226 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 NKX2-8O15522 239 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 SELEP16581 610 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 RPL29P47914 159 aaKnown RBP10.96□□□□□ -0.66
PSME3-217ENST00000622892 HOXA4Q00056 320 aaPredicted RBP10.96□□□□□ -0.66
PSME3-217ENST00000622892 BTNL3Q6UXE8 466 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 TCF23Q7RTU1 214 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 TUSC5Q8IXB3 177 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 DRAM1Q8N682 238 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 BEND2Q8NDZ0 799 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 ACY3Q96HD9 319 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 AGMATQ9BSE5 352 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 FKBP11Q9NYL4 201 aa10.96□□□□□ -0.66
PSME3-217ENST00000622892 FAM166BA8MTA8 275 aa10.95□□□□□ -0.66
PSME3-217ENST00000622892 ZNF705FA8MVS1 300 aaPredicted RBP10.95□□□□□ -0.66
PSME3-217ENST00000622892 ZNF705DP0CH99 300 aaPredicted RBP10.95□□□□□ -0.66
PSME3-217ENST00000622892 ZNF705BP0CI00 300 aaPredicted RBP10.95□□□□□ -0.66
PSME3-217ENST00000622892 IL3RAP26951 378 aa10.95□□□□□ -0.66
PSME3-217ENST00000622892 ACTL10Q5JWF8 245 aa10.95□□□□□ -0.66
PSME3-217ENST00000622892 OR1L1Q8NH94 360 aa10.95□□□□□ -0.66
PSME3-217ENST00000622892 TMEM250H0YL14 139 aa10.95□□□□□ -0.66
PSME3-217ENST00000622892 CNN1P51911 297 aaKnown RBP10.95□□□□□ -0.66
PSME3-217ENST00000622892 SSPNQ14714 243 aa10.95□□□□□ -0.66
PSME3-217ENST00000622892 IQCJQ1A5X6 159 aa10.95□□□□□ -0.66
PSME3-217ENST00000622892 RIMS4Q9H426 269 aaPredicted RBP10.95□□□□□ -0.66
PSME3-217ENST00000622892 ANKRD11Q6UB99 2663 aaPredicted RBP10.95□□□□□ -0.66
PSME3-217ENST00000622892 CHD8Q9HCK8 2581 aa10.95□□□□□ -0.66
PSME3-217ENST00000622892 TPRP12270 2363 aaKnown RBP10.95□□□□□ -0.66
PSME3-217ENST00000622892 CTXND1A0A1B0GTU2 59 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 GRIFINA4D1Z8 144 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 C11orf94C9JXX5 98 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 C1QTNF9P0C862 333 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 ZNF25P17030 456 aaPredicted RBP10.94□□□□□ -0.66
PSME3-217ENST00000622892 GCH1P30793 250 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 OR5A2Q8NGI9 324 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 TRAPPC1Q9Y5R8 145 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 COL27A1Q8IZC6 1860 aaPredicted RBP10.94□□□□□ -0.66
PSME3-217ENST00000622892 ZG16O60844 167 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 COL8A2P25067 703 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 TMEM14EPQ6UXP3 125 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 SAXO1Q8IYX7 474 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 KCNE4Q8WWG9 221 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 APOBEC3DQ96AK3 386 aaPredicted RBP10.94□□□□□ -0.66
PSME3-217ENST00000622892 SDSLQ96GA7 329 aa10.94□□□□□ -0.66
PSME3-217ENST00000622892 DNPH1O43598 174 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 NDUFB4O95168 129 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 CELA3AP09093 270 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 CEBPDP49716 269 aaPredicted RBP10.93□□□□□ -0.66
PSME3-217ENST00000622892 PDLIM4P50479 330 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 TDRG1Q3Y452 100 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 ZNF705AQ6ZN79 300 aaPredicted RBP10.93□□□□□ -0.66
PSME3-217ENST00000622892 CENPVQ7Z7K6 275 aaPredicted RBP10.93□□□□□ -0.66
PSME3-217ENST00000622892 GBGT1Q8N5D6 347 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 ZNF114Q8NC26 417 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 NEIL1Q96FI4 390 aaPredicted RBP10.93□□□□□ -0.66
PSME3-217ENST00000622892 LIN7CQ9NUP9 197 aaKnown RBP10.93□□□□□ -0.66
PSME3-217ENST00000622892 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
PSME3-217ENST00000622892 TRAV38-1A0A0B4J264 116 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 A6NNC1 897 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 ANKRD30BLA7E2S9 258 aa10.93□□□□□ -0.66
PSME3-217ENST00000622892 GGCTO75223 188 aaKnown RBP10.93□□□□□ -0.66
PSME3-217ENST00000622892 ATP5G3P48201 142 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms