RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 LYZL4Q96KX0 146 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 UHRF2Q96PU4 802 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 FAM103A1Q9BTL3 118 aaKnown RBP7.59□□□□□ -1.19
HDAC9-229ENST00000622668 GAR1Q9NY12 217 aaKnown RBP7.59□□□□□ -1.19
HDAC9-229ENST00000622668 MAB21L2Q9Y586 359 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 OR51B2Q9Y5P1 312 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 REG1AP05451 166 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 WNT2P09544 360 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 METTL15P1P0C7V9 234 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 CT45A10P0DMU9 189 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 EGR1P18146 543 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 ARL3P36405 182 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 P2RY4P51582 365 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 TMEM155Q4W5P6 130 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 LYG2Q86SG7 212 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 BPIFCQ8NFQ6 507 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 OR52B4Q8NGK2 314 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 NDFIP1Q9BT67 221 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 PRR13Q9NZ81 148 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 C5orf63A6NC05 138 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 M0QZK8 103 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 TIMM23O14925 209 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 NPFFO15130 113 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 ATP5G2Q06055 141 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 RUSC1-AS1Q66K80 236 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 LAMTOR1Q6IAA8 161 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 VKORC1L1Q8N0U8 176 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 PPIL3Q9H2H8 161 aaKnown RBP7.58□□□□□ -1.2
HDAC9-229ENST00000622668 TMEM231Q9H6L2 316 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV3OR16-13A0A075B7E8 117 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV3-74A0A0B4J1X5 117 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 UBE2L5PA0A1B0GUS4 154 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 MOSP00540 346 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 SAT2Q96F10 170 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-229ENST00000622668 LURAP1Q96LR2 239 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 ELOVL1Q9BW60 279 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 AAMDCQ9H7C9 122 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 NPDC1Q9NQX5 325 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-229ENST00000622668 RNF24Q9Y225 148 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 S4R3C0 116 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 TRBV5-7A0A0A0MS05 114 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 NPIPB11E5RHQ5 1161 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 J3KRW8 73 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV4-39P01824 125 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 FCN2Q15485 313 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 MYPOPQ86VE0 399 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-229ENST00000622668 HOGA1Q86XE5 327 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 OR4F17Q8NGA8 305 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 OR4F5Q8NH21 305 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 RBM14Q96PK6 669 aaKnown RBP7.58□□□□□ -1.2
HDAC9-229ENST00000622668 OR4F4Q96R69 305 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 PPP1R3EQ9H7J1 279 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV4-61A0A0C4DH41 118 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 ZNF705EA8MWA4 302 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-229ENST00000622668 SHISA9B4DS77 424 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 OR2A4O95047 310 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 SLC25A6P12236 298 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 NPY1RP25929 384 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 PPP1R1AQ13522 171 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 DAZAP2Q15038 168 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-229ENST00000622668 OR1B1Q8NGR6 318 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 DTD1Q8TEA8 209 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 OR2A7Q96R45 310 aa7.58□□□□□ -1.2
HDAC9-229ENST00000622668 PARP12Q9H0J9 701 aaKnown RBP7.58□□□□□ -1.2
HDAC9-229ENST00000622668 OR2J3O76001 311 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 CTSDP07339 412 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-229ENST00000622668 FGF7P21781 194 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 SAA4P35542 130 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 UBE2G1P62253 170 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 IRF3Q14653 427 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 EFNB3Q15768 340 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 TMEM255AQ5JRV8 349 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 CCDC190Q86UF4 302 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 OR4A5Q8NH83 315 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 C2orf50Q96LR7 162 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 MRPL20Q9BYC9 149 aaKnown RBP7.57□□□□□ -1.2
HDAC9-229ENST00000622668 UQCC1Q9NVA1 299 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 RCL1Q9Y2P8 373 aaKnown RBP7.57□□□□□ -1.2
HDAC9-229ENST00000622668 SORL1Q92673 2214 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV3OR16-12A0A075B7B8 117 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 ZNF503-AS2A6NEH8 195 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV3-48P01763 117 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 S100A4P26447 101 aaKnown RBP7.57□□□□□ -1.2
HDAC9-229ENST00000622668 DEFA5Q01523 94 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 ZNF273Q14593 569 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 BAK1Q16611 211 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 ZNF66Q6ZN08 573 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 PPP1R27Q86WC6 154 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 PLPPR1Q8TBJ4 325 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 IGKV1-9A0A0C4DH69 117 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 A0A0G2JLM5 398 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 PRR32B1ATL7 298 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 AP4M1O00189 453 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 CD1AP06126 327 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 PSMB6P28072 239 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 HIST3H3Q16695 136 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 ZNF329Q86UD4 541 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 STXBP6Q8NFX7 210 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 OR2G3Q8NGZ4 309 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 NTNG2Q96CW9 530 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms