RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 TRGV8A0A0C4DH27 118 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 CD1BP29016 333 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 B2MP61769 119 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 UBE2G1P62253 170 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 RHOBP62745 196 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 FUT9Q9Y231 359 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 KIAA1549LQ6ZVL6 1849 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 C5orf42Q9H799 3197 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 C12orf77C9JDV5 145 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 DLL1O00548 723 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 TFF1P04155 84 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 BPIFB3P59826 476 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 TMEM108Q6UXF1 575 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 VKORC1L1Q8N0U8 176 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 OR4P4Q8NGL7 312 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 RAB24Q969Q5 203 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 RCC1LQ96I51 464 aaKnown RBP10.9□□□□□ -0.66
MSH6-215ENST00000622629 TPPP3Q9BW30 176 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 CTDSP1Q9GZU7 261 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 MANBALQ9NQG1 85 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 ETV2O00321 342 aaPredicted RBP10.9□□□□□ -0.67
MSH6-215ENST00000622629 MMP7P09237 267 aaPredicted RBP10.9□□□□□ -0.67
MSH6-215ENST00000622629 MPV17P39210 176 aa10.9□□□□□ -0.67
MSH6-215ENST00000622629 NRN1LQ496H8 165 aa10.9□□□□□ -0.67
MSH6-215ENST00000622629 PLPPR1Q8TBJ4 325 aa10.9□□□□□ -0.67
MSH6-215ENST00000622629 TMEM56Q96MV1 263 aa10.9□□□□□ -0.67
MSH6-215ENST00000622629 DCTN5Q9BTE1 182 aa10.9□□□□□ -0.67
MSH6-215ENST00000622629 TMEM56-RWDD3S4R434 201 aa10.9□□□□□ -0.67
MSH6-215ENST00000622629 TRAV24A0A0B4J272 114 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 NDUFB3O43676 98 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 LY86O95711 162 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 OR10J4P0C629 311 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 FTH1P19P0C7X4 201 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 VWA1Q6PCB0 445 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 DPPA3Q6W0C5 159 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 BCL2L2Q92843 193 aaPredicted RBP10.89□□□□□ -0.67
MSH6-215ENST00000622629 CHD7Q9P2D1 2997 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 hADV38S2A0JD32 116 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 MARCH11A6NNE9 402 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 COX7A2P2O60397 106 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 NPY1RP25929 384 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 RSPO1Q2MKA7 263 aaPredicted RBP10.89□□□□□ -0.67
MSH6-215ENST00000622629 FAM209BQ5JX69 171 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 C16orf82Q7Z2V1 217 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 ITLN1Q8WWA0 313 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 TRAV38-1A0A0B4J264 116 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 LY6G6EA0A0G2JKS1 128 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 ODAMA1E959 279 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 MGST3O14880 152 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 SMPD2O60906 423 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 SNRPCP09234 159 aaKnown RBP10.89□□□□□ -0.67
MSH6-215ENST00000622629 EGR1P18146 543 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 ADCYAP1P18509 176 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 OPRK1P41145 380 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 B3GALT5-AS1P59052 145 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 CMTM2Q8TAZ6 248 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 LSM10Q969L4 123 aaKnown RBP10.89□□□□□ -0.67
MSH6-215ENST00000622629 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 SH2D2AQ9NP31 389 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 U3KQA8 63 aa10.89□□□□□ -0.67
MSH6-215ENST00000622629 HOXA6P31267 233 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 REG1BP48304 166 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 LOXL4Q96JB6 756 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 PACRGQ96M98 296 aaPredicted RBP10.88□□□□□ -0.67
MSH6-215ENST00000622629 RNF7Q9UBF6 113 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 PRR33A8MZF0 331 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 GYPAP02724 150 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 GFRA1P56159 465 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 ZNRF1Q8ND25 227 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 ZNF439Q8NDP4 499 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 CCL13Q99616 98 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 LILRA1O75019 489 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 CYB5R3P00387 301 aaPredicted RBP10.88□□□□□ -0.67
MSH6-215ENST00000622629 CT45A6P0DMU7 189 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 CT45A5P0DMU8 189 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 CT45A7P0DMV0 189 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 CT45A1Q5HYN5 189 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 CT45A3Q8NHU0 189 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 HS3ST6Q96QI5 342 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 VPS25Q9BRG1 176 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 PROK2Q9HC23 129 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 MRPS18CQ9Y3D5 142 aaKnown RBP10.88□□□□□ -0.67
MSH6-215ENST00000622629 PRR14LQ5THK1 2151 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 TRBV23-1A0A0A0MS06 115 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 TOX4O94842 621 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 NDUFB4O95168 129 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 SRP19P09132 144 aaKnown RBP10.88□□□□□ -0.67
MSH6-215ENST00000622629 HIST1H3AP68431 136 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 ID3Q02535 119 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 PSG5Q15238 335 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 LRRC10Q5BKY1 277 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 Q6ZT83 130 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 ZNF383Q8NA42 475 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 OR4D5Q8NGN0 318 aa10.88□□□□□ -0.67
MSH6-215ENST00000622629 PGA5P0DJD9 388 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 ANOS1P23352 680 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 NTF4P34130 210 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 TCL1AP56279 114 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 BORCS7Q96B45 105 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms