RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 LINC00470Q9BZP3 86 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 SIRT5Q9NXA8 310 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 RTTNQ86VV8 2226 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 FFAR1O14842 300 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 ATP5J2P56134 94 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 TRA2AQ13595 282 aaKnown RBP eCLIP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 IRF3Q14653 427 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 NHLRC3Q5JS37 347 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 SLC23A3Q6PIS1 610 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 LRRC29Q8WV35 223 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM56-RWDD3S4R434 201 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF638Q14966 1978 aaKnown RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 IGHV4-34P06331 123 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 ASAH2BP0C7U1 165 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 FSTP19883 344 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 HOXA5P20719 270 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 FBLN7Q53RD9 439 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 FAM222BQ8WU58 562 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 HARBI1Q96MB7 349 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 OR8B2Q96RD0 313 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 RSPO3Q9BXY4 272 aaPredicted RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 CHST5Q9GZS9 411 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 PCM1Q15154 2024 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 PLPP3O14495 311 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 EML2O95834 649 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 HOXD4P09016 255 aaPredicted RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 MGAT2Q10469 447 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 SPRED2Q7Z698 418 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 A0A1W2PQD3 144 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 C7orf71A4D174 169 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 RNASE1P07998 156 aaKnown RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 ANOS1P23352 680 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 RPL34P49207 117 aaKnown RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM177Q53S58 311 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 MDP1Q86V88 176 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 OR4A5Q8NH83 315 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 MARS2Q96GW9 593 aaKnown RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF714Q96N38 554 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 SLC6A13Q9NSD5 602 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 LAMTOR2Q9Y2Q5 125 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 SVILO95425 2214 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 PLA2G10O15496 165 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 TSPAN2O60636 221 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 ZGLP1P0C6A0 271 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 HMGA1P17096 107 aaKnown RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 SRSF4Q08170 494 aaKnown RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 CD300CQ08708 224 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 CFAP161Q6P656 301 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM92Q6UXU6 159 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 BHLHA15Q7RTS1 189 aaPredicted RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 OR10W1Q8NGF6 305 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 KCNE3Q9Y6H6 103 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 DOCK2Q92608 1830 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 SPAG17Q6Q759 2223 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 A8MWV9 139 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 LINC00587B1AMM8 73 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 J3QT63 122 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 NDUFS6O75380 124 aaKnown RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 APOMO95445 188 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 PNKDQ8N490 385 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 LRTM2Q8N967 370 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 ASB10Q8WXI3 467 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 PGLYRP3Q96LB9 341 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 ABHD14AQ9BUJ0 271 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM222Q9H0R3 208 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 PRDM13Q9H4Q3 707 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 LAMB2P55268 1798 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 NUP205Q92621 2012 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 KCNE1BA0A087WTH5 132 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 CA6P23280 308 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 KIR3DL3Q8N743 410 aa6.24□□□□□ -1.41
COLCA1-205ENST00000620864 PHLDA1Q8WV24 401 aaPredicted RBP6.24□□□□□ -1.41
COLCA1-205ENST00000620864 ANKRD31Q8N7Z5 1873 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 CD33P20138 364 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 GGTLC2Q14390 218 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 CXorf67Q86X51 503 aaPredicted RBP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 ST6GALNAC3Q8NDV1 305 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 MRGPRDQ8TDS7 321 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 MRGPRFQ96AM1 343 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 FAM181BA6NEQ2 426 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 EPOPA6NHQ4 379 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 GCSAMLQ5JQS6 135 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 MMD2Q8IY49 270 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 VKORC1L1Q8N0U8 176 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 DNASE2BQ8WZ79 361 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 TAF15Q92804 592 aaKnown RBP eCLIP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 GPR82Q96P67 336 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 DLEC1Q9Y238 1755 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 CEACAM18A8MTB9 384 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 CACNG7P62955 275 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 DNM1P46Q6ZS02 220 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 WFDC5Q8TCV5 224 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 G6PC2Q9NQR9 355 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 ZFC3H1O60293 1989 aaKnown RBP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM202A6NGA9 273 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 CXCL2P19875 107 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 GPR183P32249 361 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 GPX4P36969 197 aaPredicted RBP6.23□□□□□ -1.41
COLCA1-205ENST00000620864 RNFT1Q5M7Z0 435 aa6.23□□□□□ -1.41
COLCA1-205ENST00000620864 RGP1Q92546 391 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms