RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TPTE2P1Q5T6R2 138 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 GPR157Q5UAW9 335 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 SPNS3Q6ZMD2 512 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 LYG2Q86SG7 212 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 TCTEX1D1Q8N7M0 179 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 DRAXINQ8NBI3 349 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF431Q8TF32 576 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-209ENST00000620393 GLYATL2Q8WU03 294 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 MALSU1Q96EH3 234 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 GPHA2Q96T91 129 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 SEC22CQ9BRL7 303 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 FAM212BQ9NTI7 297 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-209ENST00000620393 TBL2Q9Y4P3 447 aaKnown RBP6.5□□□□□ -1.37
CPNE3-209ENST00000620393 ALG5Q9Y673 324 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 CSMD1Q96PZ7 3565 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 A0A0B4J293 547 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 A0A0B4J2A0 478 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 LINC00473A8K010 186 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 OOSP1A8MZH6 123 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 H0Y980 276 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 DUS4LO95620 317 aaKnown RBP6.49□□□□□ -1.37
CPNE3-209ENST00000620393 IFNA2P01563 188 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 OR5AC1P0C628 307 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 IGHV4-38-2P0DP08 117 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 ANXA3P12429 323 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF16P17020 682 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-209ENST00000620393 VAMP1P23763 118 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 BRWD1-AS2P59051 145 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 TAGLNQ01995 201 aaKnown RBP6.49□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF816Q0VGE8 651 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-209ENST00000620393 CATR1Q13166 79 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 TMEM187Q14656 261 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF585BQ52M93 769 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 KLF17Q5JT82 389 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-209ENST00000620393 LHFPL4Q7Z7J7 247 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 TGIF2LXQ8IUE1 241 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 C12orf45Q8N5I9 185 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF383Q8NA42 475 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 OR5AN1Q8NGI8 311 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 OR52B4Q8NGK2 314 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 OR51H1Q8NH63 302 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 NANPQ8TBE9 248 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 CD300LFQ8TDQ1 290 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 MITD1Q8WV92 249 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 DDB2Q92466 427 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 RPEQ96AT9 228 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 AJUBAQ96IF1 538 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 C18orf12Q96KH6 178 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 TP53RKQ96S44 253 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 NABP2Q9BQ15 211 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 MRPL20Q9BYC9 149 aaKnown RBP6.49□□□□□ -1.37
CPNE3-209ENST00000620393 OR51J1Q9H342 316 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 SHPKQ9UHJ6 478 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 PRELID3BQ9Y3B1 194 aa6.49□□□□□ -1.37
CPNE3-209ENST00000620393 AKAP9Q99996 3911 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 MAP1AP78559 2803 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-209ENST00000620393 IGHV3OR16-10A0A075B7F0 116 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 IGHV1-3A0A0C4DH29 117 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 A0A1B0GVG6 124 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 RBFOX2O43251 390 aaKnown RBP eCLIP6.48□□□□□ -1.37
CPNE3-209ENST00000620393 TXNL1O43396 289 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 CREBL2O60519 120 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-209ENST00000620393 CDS2O95674 445 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 FSHBP01225 129 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 HLA-AP01891 365 aaKnown RBP6.48□□□□□ -1.37
CPNE3-209ENST00000620393 SERPINE2P07093 398 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 RRASP10301 218 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 FOSL1P15407 271 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 UCP1P25874 307 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 MC5RP33032 325 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 KIR2DS2P43631 304 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 LPAR6P43657 344 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 REG1BP48304 166 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 KRTAP1-1Q07627 177 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 CBX3Q13185 183 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 SLC9A3R2Q15599 337 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 SSX2Q16385 188 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 ANKRD55Q3KP44 614 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 CCDC144NLQ6NUI1 221 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 MOB3BQ86TA1 216 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 SPAG16Q8N0X2 631 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 LGI3Q8N145 548 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 OR8H3Q8N146 312 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 TEX29Q8N6K0 151 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 LRTM2Q8N967 370 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 COQ8AQ8NI60 647 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 CASTOR1Q8WTX7 329 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 TCTEX1D2Q8WW35 142 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 TMEM56Q96MV1 263 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 PHB2Q99623 299 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 TMEM222Q9H0R3 208 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 MEGF9Q9H1U4 602 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 LIN7CQ9NUP9 197 aaKnown RBP6.48□□□□□ -1.37
CPNE3-209ENST00000620393 HILPDAQ9Y5L2 63 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 TMEM56-RWDD3S4R434 201 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 DSCAML1Q8TD84 2053 aa6.48□□□□□ -1.37
CPNE3-209ENST00000620393 YLPM1P49750 1951 aaKnown RBP6.48□□□□□ -1.37
CPNE3-209ENST00000620393 BAHCC1Q9P281 2608 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 TRAV40A0A0B4J280 105 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 PIGBOS1A0A0B4J2F0 54 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms