RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 RPS11P62280 158 aaKnown RBP eCLIP1.17□□□□□ -2.22
TARDBP-220ENST00000618606 IFITM2Q01629 132 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 EMX1Q04741 257 aaPredicted RBP1.17□□□□□ -2.22
TARDBP-220ENST00000618606 EBPQ15125 230 aaKnown RBP1.17□□□□□ -2.22
TARDBP-220ENST00000618606 ZNF141Q15928 474 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 MRPL51Q4U2R6 128 aaKnown RBP1.17□□□□□ -2.22
TARDBP-220ENST00000618606 FAM78BQ5VT40 261 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 NOXRED1Q6NXP6 359 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 Q6ZQT7 251 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 LYZL2Q7Z4W2 148 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 NIT1Q86X76 327 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 MSRB3Q8IXL7 192 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 EIF4E3Q8N5X7 224 aaKnown RBP1.17□□□□□ -2.22
TARDBP-220ENST00000618606 CLDN22Q8N7P3 220 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 Q8NAQ8 132 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 OR4K13Q8NH42 304 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 CD200R1Q8TD46 325 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 LMX1AQ8TE12 382 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 RNASE6Q93091 150 aaKnown RBP1.17□□□□□ -2.22
TARDBP-220ENST00000618606 SLC35B4Q969S0 331 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 PPP1R2P1Q96PQ5 205 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 TBX5Q99593 518 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 SLC2A9Q9NRM0 540 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 CMTM6Q9NX76 183 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 EMC3Q9P0I2 261 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 ANAPC10Q9UM13 185 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 SLC22A13Q9Y226 551 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 LSM5Q9Y4Y9 91 aaKnown RBP1.17□□□□□ -2.22
TARDBP-220ENST00000618606 TICRRQ7Z2Z1 1910 aa1.17□□□□□ -2.22
TARDBP-220ENST00000618606 ADAMTSL1Q8N6G6 1762 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 LOC102725191A0A1B0GVB3 256 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 MDFIC2A0A1B0GVS7 189 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 VPS37CA5D8V6 355 aaPredicted RBP1.16□□□□□ -2.22
TARDBP-220ENST00000618606 OR6C6A6NF89 314 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 SMIM9A6NGZ8 99 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 VGLL3A8MV65 326 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 D6RAR5 112 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 CNIH1O95406 144 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 FGF6P10767 208 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 ESDP10768 282 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 MYL12AP19105 171 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 ALOX5APP20292 161 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 DDTP30046 118 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 OPRM1P35372 400 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 CAPZBP47756 277 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 SULT1A1P50225 295 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 TSPEAR-AS2P59090 65 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 CCL7P80098 99 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 SRSF6Q13247 344 aaKnown RBP1.16□□□□□ -2.22
TARDBP-220ENST00000618606 PMAIP1Q13794 54 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 SPIN3Q5JUX0 258 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 FAM201AQ5SY85 155 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 ZNF550Q7Z398 422 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 GPHB5Q86YW7 130 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 UMODL1-AS1Q8N2C9 162 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 C3orf22Q8N5N4 141 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 LY6G5BQ8NDX9 201 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 BPIFB6Q8NFQ5 453 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 RAB2BQ8WUD1 216 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 IMP4Q96G21 291 aaKnown RBP1.16□□□□□ -2.22
TARDBP-220ENST00000618606 IGF2BP2-AS1Q96M15 143 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 C11orf1Q9H5F2 150 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 VPS29Q9UBQ0 182 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 FIS1Q9Y3D6 152 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 PXMP4Q9Y6I8 212 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 SCN4AP35499 1836 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 SVILO95425 2214 aa1.16□□□□□ -2.22
TARDBP-220ENST00000618606 MYO5BQ9ULV0 1848 aa1.15□□□□□ -2.22
TARDBP-220ENST00000618606 A0A087WUJ7 227 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 A0A1B0GU33 70 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 A0A1W2PNN7 141 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 C17orf98A8MV24 154 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 A8MWP6 167 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 EEF1E1-BLOC1S5C9J1V9 151 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 DENRO43583 198 aaKnown RBP1.15□□□□□ -2.23
TARDBP-220ENST00000618606 LY6HO94772 140 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 CPSF4O95639 269 aaKnown RBP1.15□□□□□ -2.23
TARDBP-220ENST00000618606 KRT75O95678 551 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 MT-CO2P00403 227 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 SOD1P00441 154 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 CD7P09564 240 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 IGHV3-30-3P0DP02 117 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 NEFHP12036 1026 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 S100A5P33763 92 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 SLCO1A2P46721 670 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 MARCKSL1P49006 195 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 IDH3GP51553 393 aaPredicted RBP1.15□□□□□ -2.23
TARDBP-220ENST00000618606 RAP1GDS1P52306 607 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 OR4D2P58180 307 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 RUNX1Q01196 453 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 BAMBIQ13145 260 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 BIKQ13323 160 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 HTR4Q13639 388 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 HIST3H3Q16695 136 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 ACOT6Q3I5F7 207 aaPredicted RBP1.15□□□□□ -2.23
TARDBP-220ENST00000618606 DEFB134Q4QY38 66 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 AMMECR1LQ6DCA0 310 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 FAM173BQ6P4H8 233 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 RASL11AQ6T310 242 aa1.15□□□□□ -2.23
TARDBP-220ENST00000618606 LRRC25Q8N386 305 aaPredicted RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms