RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 RBMY1EA6NEQ0 496 aaKnown RBP13.11□□□□□ -0.31
COL5A1-208ENST00000618395 RBMY1DP0C7P1 496 aaKnown RBP13.11□□□□□ -0.31
COL5A1-208ENST00000618395 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
COL5A1-208ENST00000618395 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
COL5A1-208ENST00000618395 C1orf194Q5T5A4 169 aa13.11□□□□□ -0.31
COL5A1-208ENST00000618395 GLRX5Q86SX6 157 aa13.11□□□□□ -0.31
COL5A1-208ENST00000618395 HOGA1Q86XE5 327 aa13.11□□□□□ -0.31
COL5A1-208ENST00000618395 OR4C3Q8NH37 302 aa13.11□□□□□ -0.31
COL5A1-208ENST00000618395 MRM2Q9UI43 246 aaKnown RBP13.11□□□□□ -0.31
COL5A1-208ENST00000618395 H0YIG0 161 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 EDN1P05305 212 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 SFTA2Q6UW10 78 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 TMEM202A6NGA9 273 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 FGF17O60258 216 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 MFAP4P55083 255 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 TMEM252Q8N6L7 170 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 DLX4Q92988 240 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-208ENST00000618395 SUMO3P55854 103 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-208ENST00000618395 ERVK11-1P61568 191 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 CCL28Q9NRJ3 127 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 ANKRD10Q9NXR5 420 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 TRAV38-1A0A0B4J264 116 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 A0A1B0GTH9 108 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 DHHO43323 396 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 HLA-DQB1P01920 261 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 LGALS1P09382 135 aaKnown RBP13.1□□□□□ -0.31
COL5A1-208ENST00000618395 CDKN3Q16667 212 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 OR1L8Q8NGR8 309 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 SRSF12Q8WXF0 261 aaKnown RBP13.1□□□□□ -0.31
COL5A1-208ENST00000618395 ALKBH3Q96Q83 286 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-208ENST00000618395 CD8AP01732 235 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 APOHP02749 345 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-208ENST00000618395 ZNF865P0CJ78 1059 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-208ENST00000618395 MRGPRX3Q96LB0 322 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 RTN4RQ9BZR6 473 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 M0R1B8 84 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 TNFRSF1AP19438 455 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 ZNF764Q96H86 408 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-208ENST00000618395 CD38P28907 300 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 SELENOTP62341 195 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 C1QL4Q86Z23 238 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 MORN4Q8NDC4 146 aa13.1□□□□□ -0.31
COL5A1-208ENST00000618395 NDUFA3O95167 84 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 PRSS27Q9BQR3 290 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 PMVKQ15126 192 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 ATXN8Q156A1 80 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 CXorf67Q86X51 503 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-208ENST00000618395 ASB5Q8WWX0 329 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 STARD6P59095 220 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 SUMO2P61956 95 aaKnown RBP13.09□□□□□ -0.31
COL5A1-208ENST00000618395 OR8B12Q8NGG6 310 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-208ENST00000618395 EPDR1Q9UM22 224 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 CLEC2AQ6UVW9 174 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 IGHV3-43A0A0B4J1X8 118 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 IGHV3-43DP0DP04 118 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 SLC23A3Q6PIS1 610 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 PDLIM7Q9NR12 457 aa13.09□□□□□ -0.31
COL5A1-208ENST00000618395 OR6X1Q8NH79 312 aa13.08□□□□□ -0.31
COL5A1-208ENST00000618395 TRBV20OR9-2A0A075B6H5 130 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 C19orf24Q9BVV8 132 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 RREB1Q92766 1687 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 ANOS1P23352 680 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 IFITM1P13164 125 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 TRAV2A0A0B4J234 112 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 SLC25A20O43772 301 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 CA7P43166 264 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 OR10J3Q5JRS4 329 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 ZNF815PA8K554 130 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 UCP3P55916 312 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 MS4A6AQ9H2W1 248 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 CEACAM18A8MTB9 384 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 HEPN1Q6WQI6 88 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 LILRA3Q8N6C8 439 aaPredicted RBP13.08□□□□□ -0.32
COL5A1-208ENST00000618395 NFAM1Q8NET5 270 aaPredicted RBP13.08□□□□□ -0.32
COL5A1-208ENST00000618395 SCNM1Q9BWG6 230 aa13.08□□□□□ -0.32
COL5A1-208ENST00000618395 TMEM8BA6NDV4 472 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
COL5A1-208ENST00000618395 HIST3H2BBQ8N257 126 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 COA4Q9NYJ1 87 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 DOCK4Q8N1I0 1966 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 COL1A1P02452 1464 aaPredicted RBP13.07□□□□□ -0.32
COL5A1-208ENST00000618395 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 POU2AF1Q16633 256 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 TMEM222Q9H0R3 208 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 GPR35Q9HC97 309 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 CEACAM3P40198 252 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 RNF122Q9H9V4 155 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 SDK2Q58EX2 2172 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 IGHV1-69-2A0A0G2JMI3 117 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 SYNGR1O43759 233 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 PRTN3P24158 256 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 SPSB2Q99619 263 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 LOC105371242A0A075B767 164 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 PPIAL4CA0A0B4J2A2 164 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 PPIAL4GP0DN37 164 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 ID1P41134 155 aa13.07□□□□□ -0.32
COL5A1-208ENST00000618395 HSF5Q4G112 596 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms