RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ZNF705DP0CH99 300 aaPredicted RBP11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZNF705BP0CI00 300 aaPredicted RBP11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 TGIF2LYQ8IUE0 185 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 TGIF2LXQ8IUE1 241 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 PRO3102Q9H379 93 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 HES4Q9HCC6 221 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 DBX1A6NMT0 343 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZNF90Q03938 601 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 C12orf57Q99622 126 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 A0A1W2PRD5 423 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 A0A1W2PRF3 423 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 A0A1W2PRM7 423 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 PAGE4O60829 102 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 NAPSAO96009 420 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 CD1BP29016 333 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 RHOBP62745 196 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 WDR82Q6UXN9 313 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 SLC35E3Q7Z769 313 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 SAMD10Q9BYL1 202 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 ABCA4P78363 2273 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 FAM90A26D6RGX4 464 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 K7N7A8 449 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 COLCA1Q6ZS62 124 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 GCSAMQ8N6F7 178 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 FLYWCH2Q96CP2 140 aaKnown RBP11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 LURAP1Q96LR2 239 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 GINS3Q9BRX5 216 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 JPT1Q9UK76 154 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 PRNDQ9UKY0 176 aa11.13□□□□□ -0.63
PPP4R3B-206ENST00000616407 IGHV1-18A0A0C4DH31 117 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 CTXND1A0A1B0GTU2 59 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 C17orf98A8MV24 154 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 PTBP3O95758 552 aaKnown RBP11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 ANOS1P23352 680 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 CD40P25942 277 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 PRRX1P54821 245 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 ASCL4Q6XD76 172 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZNF497Q6ZNH5 498 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 CMTM2Q8TAZ6 248 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 MISP3Q96FF7 219 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 DOK5Q9P104 306 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 CHRNA7P36544 502 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 CHD7Q9P2D1 2997 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 IL19Q9UHD0 177 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 NCOA6Q14686 2063 aaPredicted RBP11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 SHANK1Q9Y566 2161 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 BPIFB3P59826 476 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 SPCS3P61009 180 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 BSXQ3C1V8 233 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 RPL39P5Q59GN2 51 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 VSTM2AQ8TAG5 236 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 FAM57AQ8TBR7 257 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 SMIM8Q96KF7 97 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 C11orf94C9JXX5 98 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 B2MP61769 119 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 UBE2G1P62253 170 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 FAM78BQ5VT40 261 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 BSCL2Q96G97 398 aaPredicted RBP11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 FAM210BQ96KR6 192 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZNF714Q96N38 554 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 DIRC2Q96SL1 478 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 RAB1BQ9H0U4 201 aa11.12□□□□□ -0.63
PPP4R3B-206ENST00000616407 FREM1Q5H8C1 2179 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 FAM87AP0C7U9 286 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 BCL2P10415 239 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 FABP9Q0Z7S8 132 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 S100A7AQ86SG5 101 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 EIF4E3Q8N5X7 224 aaKnown RBP11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 LRTM2Q8N967 370 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 RAB1CQ92928 201 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 CLCF1Q9UBD9 225 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 MED13Q9UHV7 2174 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZNF503-AS2A6NEH8 195 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 YIF1AO95070 293 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 PNRC1Q12796 327 aaPredicted RBP11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 STARD4Q96DR4 205 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 SCNM1Q9BWG6 230 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 SMDT1Q9H4I9 107 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 RPRMQ9NS64 109 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 TMEM140Q9NV12 185 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 TMEM131Q92545 1883 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 SPP1P10451 314 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 SRSF3P84103 164 aaKnown RBP11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 PRR7Q8TB68 274 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 PLSCR4Q9NRQ2 329 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 CYTL1Q9NRR1 136 aa11.11□□□□□ -0.63
PPP4R3B-206ENST00000616407 PSPNO60542 156 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 RAB5AP20339 215 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 DBX2Q6ZNG2 339 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 LRP11Q86VZ4 500 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 OR10A7Q8NGE5 316 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 CISD1Q9NZ45 108 aaKnown RBP11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 G3V3Q6 166 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 SRSF4Q08170 494 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms