RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 HSD17B10Q99714 261 aaKnown RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CXXC4Q9H2H0 198 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 VAX2Q9UIW0 290 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 AUP1Q9Y679 476 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 MDFIC2A0A1B0GVS7 189 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 CEBPDP49716 269 aaPredicted RBP4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 IGFBP7Q16270 282 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 GABRA6Q16445 453 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF880Q6PDB4 577 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 MOGAT3Q86VF5 341 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM171Q8WVE6 324 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 NBEAQ8NFP9 2946 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 IL18BPO95998 194 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 HSPB1P04792 205 aaKnown RBP4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 CD5P06127 495 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 CECR9P0C854 216 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 CD59P13987 128 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 CCL20P78556 96 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 DLK1P80370 383 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 FFAR4Q5NUL3 377 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 TCTEX1D1Q8N7M0 179 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 NECAP1Q8NC96 275 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR13D1Q8NGV5 346 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 DCTN5Q9BTE1 182 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 ABHD14AQ9BUJ0 271 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 CLN8Q9UBY8 286 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 MIOXQ9UGB7 285 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 TIMM8BQ9Y5J9 83 aaPredicted RBP4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 MARCH11A6NNE9 402 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 C9JQL5 133 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 K7N7A8 449 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 FGF7P21781 194 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 SSTR5P35346 364 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 PCSK4Q6UW60 755 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 BTNL3Q6UXE8 466 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 LINC00596Q86U02 117 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 F8P00451 2351 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 FAM90A26D6RGX4 464 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 PSPNO60542 156 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 APOA2P02652 100 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 NMSQ5H8A3 153 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 SSMEM1Q8WWF3 244 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 IFT22Q9H7X7 185 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 OOEPA6NGQ2 149 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 AHRRA9YTQ3 701 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 PITX3O75364 302 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF737O75373 536 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR8U8P0C7N1 319 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 MDKP21741 143 aaPredicted RBP4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM108Q6UXF1 575 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 PLPPR1Q8TBJ4 325 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 SSC4DQ8WTU2 575 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM68Q96MH6 324 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 GINS3Q9BRX5 216 aa4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 AURKAIP1Q9NWT8 199 aaPredicted RBP4.78□□□□□ -1.64
SYNCRIP-204ENST00000616122 HAX1O00165 279 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 PAGE4O60829 102 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 CLDN14O95500 239 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 CELA3BP08861 270 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 SLC35E3Q7Z769 313 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR4S2Q8NH73 311 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ANAPC10Q9UM13 185 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 MGAM2Q2M2H8 2515 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 A0A1W2PPE3 182 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 F5H697 171 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 GATCO43716 136 aaKnown RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 TNFRSF9Q07011 255 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 VWA1Q6PCB0 445 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 Q6ZRM9 215 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNRF1Q8ND25 227 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ABHD5Q8WTS1 349 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 BARX1Q9HBU1 254 aaPredicted RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 IL19Q9UHD0 177 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 WIPI2Q9Y4P8 454 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 TMEM210A6NLX4 147 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF705FA8MVS1 300 aaPredicted RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 TMEM250H0YL14 139 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF705DP0CH99 300 aaPredicted RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF705BP0CI00 300 aaPredicted RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 SMIM6P0DI80 62 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ADCYAP1P18509 176 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 B2MP61769 119 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 TNFAIP6P98066 277 aaPredicted RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 CCL17Q92583 94 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 TAAR6Q96RI8 345 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 RARRES2Q99969 163 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 FRMPD3Q5JV73 1810 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 IGKV1-6A0A0C4DH72 117 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 SEC14L6B5MCN3 397 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 TSTD3H0UI37 97 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 IGLV3-1P01715 115 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 SLC25A6P12236 298 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 MRPL41Q8IXM3 137 aaKnown RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR2T10Q8NGZ9 312 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 LSM10Q969L4 123 aaKnown RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 SNX22Q96L94 193 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 hADV38S2A0JD32 116 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZG16O60844 167 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 NPY1RP25929 384 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 MST1LQ2TV78 715 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms