RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SSPNQ14714 243 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 RGS7BPQ6MZT1 257 aaPredicted RBP8.12□□□□□ -1.11
COL12A1-211ENST00000615798 SPRED2Q7Z698 418 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 OR9G4Q8NGQ1 327 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 SDF2Q99470 211 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 ERVK11-1P61568 191 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 C1orf140Q5VVS0 124 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 PLPP2O43688 288 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 GGTLC2Q14390 218 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 hADV38S2A0JD32 116 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 TIMM10BQ9Y5J6 103 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 MGST3O14880 152 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 ICOSLGO75144 302 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 DNAJC30Q96LL9 226 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 NEUROG3Q9Y4Z2 214 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 A0A0A6YYD5 115 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 A0A1W2PR48 441 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 GJB3O75712 270 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 RBMY1FQ15415 496 aaKnown RBP8.11□□□□□ -1.11
COL12A1-211ENST00000615798 RASL11BQ9BPW5 248 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 TNFRSF12AQ9NP84 129 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 LAMTOR1Q6IAA8 161 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 C7orf66A4D0T2 115 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 KLF4O43474 513 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 HIKESHIQ53FT3 197 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 HIGD1AQ9Y241 93 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 M0R2P5 195 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 NDUFA3O95167 84 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 CD1AP06126 327 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 CA6P23280 308 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 EIF4EBP2Q13542 120 aaPredicted RBP8.11□□□□□ -1.11
COL12A1-211ENST00000615798 INSIG2Q9Y5U4 225 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 UBE2CO00762 179 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 BTG2P78543 158 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 LRRC10Q5BKY1 277 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 Q6ZSR6 202 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 SSMEM1Q8WWF3 244 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 SSR4P51571 173 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 DCAF10Q5QP82 559 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 TP53I13Q8NBR0 393 aaPredicted RBP8.11□□□□□ -1.11
COL12A1-211ENST00000615798 ZNF391Q9UJN7 358 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 TNFSF13O75888 250 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 ASAH2BP0C7U1 165 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 SSTR5P35346 364 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 OR11H7Q8NGC8 314 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 CRYBB2P43320 205 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 CSRP3P50461 194 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 FBLIM1Q8WUP2 373 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 RPRMQ9NS64 109 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 WNT5AP41221 380 aa8.11□□□□□ -1.11
COL12A1-211ENST00000615798 RPS4XP62701 263 aaKnown RBP8.11□□□□□ -1.11
COL12A1-211ENST00000615798 RNASEH2CQ8TDP1 164 aaKnown RBP8.1□□□□□ -1.11
COL12A1-211ENST00000615798 ELSPBP1Q96BH3 223 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 COA3Q9Y2R0 106 aaPredicted RBP8.1□□□□□ -1.11
COL12A1-211ENST00000615798 DHHO43323 396 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 NDUFB4O95168 129 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 FAM219AQ8IW50 185 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 LAT2Q9GZY6 243 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 TAAR3PQ9P1P4 343 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 TOMM40O96008 361 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 PSG1P11464 419 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 CEACAM6P40199 344 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 SLC25A26Q70HW3 274 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 MSRB3Q8IXL7 192 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 CHST5Q9GZS9 411 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 PLXNB2O15031 1838 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 PPICP45877 212 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 HINT3Q9NQE9 182 aaKnown RBP8.1□□□□□ -1.11
COL12A1-211ENST00000615798 ADAMTSL1Q8N6G6 1762 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 PRRT4C9JH25 899 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 NTN1O95631 604 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 TMEM144Q7Z5S9 345 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 GPR82Q96P67 336 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 LPAR2Q9HBW0 351 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 A0A1B0GTH9 108 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 CBLN1P23435 193 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 NPC2P61916 151 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 C1orf53Q5VUE5 145 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 PPDPFLQ8WWR9 84 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 SPSB1Q96BD6 273 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 ARHGAP5-AS1Q96IT6 56 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 PTPRQQ9UMZ3 2332 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 SLC25A1P53007 311 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 ZNF121P58317 390 aaPredicted RBP8.1□□□□□ -1.11
COL12A1-211ENST00000615798 SMAD2Q15796 467 aaKnown RBP8.1□□□□□ -1.11
COL12A1-211ENST00000615798 TSACCQ96A04 125 aaPredicted RBP8.1□□□□□ -1.11
COL12A1-211ENST00000615798 SCGB3A1Q96QR1 104 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 CXCL16Q9H2A7 254 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 NAPSAO96009 420 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 CYB561P49447 251 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 SLC16A11Q8NCK7 471 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 BAHD1Q8TBE0 780 aaPredicted RBP8.1□□□□□ -1.11
COL12A1-211ENST00000615798 HCFC1R1Q9NWW0 138 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 HCFC2Q9Y5Z7 792 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 U3KQE9 123 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 LDB3O75112 727 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 CXCL3P19876 107 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.1□□□□□ -1.11
COL12A1-211ENST00000615798 CTAG2O75638 210 aa8.1□□□□□ -1.11
COL12A1-211ENST00000615798 CD38P28907 300 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms