RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 FAM214BQ7L5A3 538 aa3.95□□□□□ -1.78
CHD9-221ENST00000615216 SLC22A18ASQ8N1D0 253 aa3.95□□□□□ -1.78
CHD9-221ENST00000615216 QTRT1Q9BXR0 403 aaKnown RBP3.95□□□□□ -1.78
CHD9-221ENST00000615216 TMEM56-RWDD3S4R434 201 aa3.95□□□□□ -1.78
CHD9-221ENST00000615216 K7ERU9 68 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 KBTBD11O94819 623 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 COX6CP09669 75 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TMEM171Q8WVE6 324 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 NPDC1Q9NQX5 325 aaPredicted RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 C17orf51A8MQB3 221 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 UPK3AO75631 287 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 CD74P04233 296 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 MFAP2P55001 183 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 RELQ04864 619 aaPredicted RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 RRN3P1Q2M238 152 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 FHL5Q5TD97 284 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 CLEC2AQ6UVW9 174 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 MARVELD3Q96A59 401 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 HSPB7Q9UBY9 170 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 RABAC1Q9UI14 185 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 ZNF256Q9Y2P7 627 aaPredicted RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 VWA8A3KMH1 1905 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 CDK2AP1O14519 115 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 ADRA2AP08913 450 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 CCL4P13236 92 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 PRF1P14222 555 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TSPOP30536 169 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 WNT5AP41221 380 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 ZNF880Q6PDB4 577 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 ZCCHC14Q8WYQ9 949 aaKnown RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 TMEM54Q969K7 222 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 MIEN1Q9BRT3 115 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 HDHD3Q9BSH5 251 aaPredicted RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 ZNF71Q9NQZ8 489 aaPredicted RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 OR5AC2Q9NZP5 309 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 IGLV1-36A0A0B4J1U3 117 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 CCL21O00585 134 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TNFRSF9Q07011 255 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 DNLZQ5SXM8 178 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 LRRC75AQ8NAA5 344 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 Q96M66 194 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TBX15Q96SF7 602 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 GGACTQ9BVM4 153 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 JPT1Q9UK76 154 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 HELZP42694 1942 aaKnown RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 ARL14EPLP0DKL9 152 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 ZNF658BQ4V348 819 aaPredicted RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 IGSF11Q5DX21 431 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 FAM181AQ8N9Y4 354 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TAF15Q92804 592 aaKnown RBP eCLIP3.94□□□□□ -1.78
CHD9-221ENST00000615216 RSG1Q9BU20 258 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TREM2Q9NZC2 230 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 FER1L5A0AVI2 2057 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 LNP1A1A4G5 178 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 NUBP1P53384 320 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 DCAF12L2Q5VW00 463 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 C10orf111Q8N326 155 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 OR4C13Q8NGP0 309 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 SCARF2Q96GP6 870 aaPredicted RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 ZNF385AQ96PM9 386 aaKnown RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 ELOVL5Q9NYP7 299 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TRBV23-1A0A0A0MS06 115 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 PGLYRP1O75594 196 aaPredicted RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 NUDT3O95989 172 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 DANCRP0C864 163 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 LINC00869P0C866 280 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 ZNF25P17030 456 aaPredicted RBP3.94□□□□□ -1.78
CHD9-221ENST00000615216 MPV17P39210 176 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 LOXL3P58215 753 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 OR4A47Q6IF82 309 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 UNQ9370/PRO34162Q6UXP9 181 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 PRR7Q8TB68 274 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TMEM70Q9BUB7 260 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 GP6Q9HCN6 339 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 GPR132Q9UNW8 380 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 LHFPL6Q9Y693 200 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 PI4KAP42356 2102 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 FOLR2P14207 255 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 CTSSP25774 331 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 RFLNBQ8N5W9 214 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TMEM52Q8NDY8 209 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 TMEM190Q8WZ59 177 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 SPSB4Q96A44 273 aa3.94□□□□□ -1.78
CHD9-221ENST00000615216 MPTX1A8MV57 137 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 PPP1R17O96001 155 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 IL9P15248 144 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 CKS2P33552 79 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 CIRBPQ14011 172 aaKnown RBP3.93□□□□□ -1.78
CHD9-221ENST00000615216 C10orf128Q5T292 105 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 SAMD13Q5VXD3 122 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 ZNF841Q6ZN19 808 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.93□□□□□ -1.78
CHD9-221ENST00000615216 TMEM140Q9NV12 185 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 METTL1Q9UBP6 276 aaKnown RBP3.93□□□□□ -1.78
CHD9-221ENST00000615216 LOC389332A0A1B0GUA5 103 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 GPR6P46095 362 aaPredicted RBP3.93□□□□□ -1.78
CHD9-221ENST00000615216 MFAP4P55083 255 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 ASXL3Q9C0F0 2248 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 ODAMA1E959 279 aa3.93□□□□□ -1.78
CHD9-221ENST00000615216 ZNF729A6NN14 1252 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms