RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 OOEPA6NGQ2 149 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 SPRY3O43610 288 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 IGHV2-5P01817 119 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 GNG10P50151 68 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 TCL1AP56279 114 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 Q0VFX4 171 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 HIST3H2BBQ8N257 126 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 POM121L2Q96KW2 1035 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 LRFN3Q9BTN0 628 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 PRDM6Q9NQX0 595 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 HEATR1Q9H583 2144 aaKnown RBP10.62□□□□□ -0.71
MSH6-213ENST00000614496 XIRP2A4UGR9 3374 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 DBX2Q6ZNG2 339 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 OR51G1Q8NGK1 321 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 DECR2Q9NUI1 292 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 FKBP11Q9NYL4 201 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 IL17BQ9UHF5 180 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 SH3BGRL2Q9UJC5 107 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 IGHV3OR15-7A0A075B7D8 119 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 C17orf98A8MV24 154 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 IRF2P14316 349 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 ASCL4Q6XD76 172 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 ANAPC16Q96DE5 110 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 PSMG3Q9BT73 122 aaPredicted RBP10.62□□□□□ -0.71
MSH6-213ENST00000614496 DCTN5Q9BTE1 182 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 EGLN1Q9GZT9 426 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 USF3Q68DE3 2245 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 HIST1H1BP16401 226 aaKnown RBP10.62□□□□□ -0.71
MSH6-213ENST00000614496 CTAG1AP78358 180 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 UBALD2Q8IYN6 164 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 BTF3L4Q96K17 158 aa10.62□□□□□ -0.71
MSH6-213ENST00000614496 FCN1O00602 326 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 IGKV1-5P01602 117 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 SP1P08047 785 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 SNRPCP09234 159 aaKnown RBP10.61□□□□□ -0.71
MSH6-213ENST00000614496 CD1BP29016 333 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 LYG1Q8N1E2 194 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 ZNF703Q9H7S9 590 aaPredicted RBP10.61□□□□□ -0.71
MSH6-213ENST00000614496 SRD5A3Q9H8P0 318 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 PARD6AQ9NPB6 346 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 PRR14LQ5THK1 2151 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 PGPEP1LA6NFU8 196 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 C1QTNF9BB2RNN3 333 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 NDUFB7P17568 137 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 CNN1P51911 297 aaKnown RBP10.61□□□□□ -0.71
MSH6-213ENST00000614496 RPL23P62829 140 aaKnown RBP10.61□□□□□ -0.71
MSH6-213ENST00000614496 SLC35B1P78383 322 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 P2RY6Q15077 328 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 MIC13Q5XKP0 118 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 OR10G8Q8NGN5 311 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 LYPD6BQ8NI32 183 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 PKIBQ9C010 78 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 GRIFINA4D1Z8 144 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 FAM157AC9JC47 383 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 C12orf77C9JDV5 145 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 M0R1B8 84 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 TCAPO15273 167 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 PMCHP20382 165 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 SOX8P57073 446 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 LINC00205P59089 165 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 C1QL4Q86Z23 238 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 HIST1H2BLQ99880 126 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 ZPBPQ9BS86 351 aa10.61□□□□□ -0.71
MSH6-213ENST00000614496 SEBOXQ9HB31 216 aaPredicted RBP10.61□□□□□ -0.71
MSH6-213ENST00000614496 ZNF83P51522 516 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 PAX9P55771 341 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 CRIP3Q6Q6R5 217 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 CYP2G1PQ6ZSU1 146 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 RPP25LQ8N5L8 163 aaKnown RBP10.6□□□□□ -0.71
MSH6-213ENST00000614496 ZNF645Q8N7E2 425 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 OR4P4Q8NGL7 312 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 LRRC30A6NM36 301 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 UCP2P55851 309 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 TIGITQ495A1 244 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 TMEM183AQ8IXX5 376 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 LEAP2Q969E1 77 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 B4E171 279 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 TSPAN7P41732 249 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 LHX2P50458 406 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 MZT1Q08AG7 82 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 FAM90A2PQ658T7 463 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 PRR27Q6MZM9 219 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 ACSM6Q6P461 480 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 C1orf210Q8IVY1 113 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 CMTM2Q8TAZ6 248 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 ABHD5Q8WTS1 349 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 HSD17B10Q99714 261 aaKnown RBP10.6□□□□□ -0.71
MSH6-213ENST00000614496 NAT8BQ9UHF3 227 aa10.6□□□□□ -0.71
MSH6-213ENST00000614496 ABCA1O95477 2261 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 LY6G6EA0A0G2JKS1 128 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 A0A1B0GW64 132 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 COX5BP10606 129 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 WNT5AP41221 380 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 HOXA4Q00056 320 aaPredicted RBP10.59□□□□□ -0.71
MSH6-213ENST00000614496 GCSAMLQ5JQS6 135 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 FAM53AQ6NSI3 398 aaPredicted RBP10.59□□□□□ -0.71
MSH6-213ENST00000614496 REC114Q7Z4M0 266 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 ABHD12Q8N2K0 398 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 SIGLECL1Q8N7X8 197 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 TMEM105Q8N8V8 129 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms