RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 MRGPREQ86SM8 312 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PTOV1Q86YD1 416 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 WFDC11Q8NEX6 87 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SPTSSBQ8NFR3 76 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MMP25Q9NPA2 562 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OPN4Q9UHM6 478 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 RGPD5Q99666 1765 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PMS2P2O95744 297 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 IGLV3-25P01717 112 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TAL2Q16559 108 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 HAPLN4Q86UW8 402 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 HGDQ93099 445 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 BCL2L10Q9HD36 194 aa9.46□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PLK5Q496M5 336 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LRP5O75197 1615 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 C11orf94C9JXX5 98 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MSRB3Q8IXL7 192 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR5C1Q8NGR4 320 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TMEM255BQ8WV15 326 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 AKAP11Q9UKA4 1901 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TRGC1P0CF51 173 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LRTM2Q8N967 370 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR52I1Q8NGK6 324 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TXNDC17Q9BRA2 123 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CYB5R1Q9UHQ9 305 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 IGHV3OR16-8A0A075B7F1 116 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LDLRAD2Q5SZI1 272 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 C1orf140Q5VVS0 124 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TMEFF2Q9UIK5 374 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 RND2P52198 227 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 RAB24Q969Q5 203 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 A0A1B0GX78 115 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 A0A1W2PP11 408 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TMEM250H0YL14 139 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CTSDP07339 412 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MPV17LQ2QL34 196 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 HTR3DQ70Z44 454 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 FAM216AQ8WUB2 273 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 JMJD8Q96S16 334 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TMEM74BQ9NUR3 256 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ANK1P16157 1881 aa9.45□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PEX11BO96011 259 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 GALP22466 123 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 HPXP02790 462 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CDKN1BP46527 198 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 AANATQ16613 207 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SLC25A42Q86VD7 318 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ZNF107Q9UII5 783 aaPredicted RBP9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 DOCK4Q8N1I0 1966 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SOD1P00441 154 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ATP6V0CP27449 155 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 FZD5Q13467 585 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 DCAF12L2Q5VW00 463 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CLEC18BQ6UXF7 455 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 RTL10Q7L3V2 364 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SLC16A13Q7RTY0 426 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 NKAIN4Q8IVV8 208 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MRPL43Q8N983 215 aaKnown RBP9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 WSB1Q9Y6I7 421 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ACACAQ13085 2346 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TJP1Q07157 1748 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MED12LQ86YW9 2145 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR2A4O95047 310 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 EMC4Q5J8M3 183 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 C17orf77Q96MU5 243 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 VSTM2LQ96N03 204 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR2A7Q96R45 310 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 DERL1Q9BUN8 251 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ENTPD2Q9Y5L3 495 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 NAV1Q8NEY1 1877 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ZFP36L2P47974 494 aaKnown RBP9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CASC2Q6XLA1 102 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TCF23Q7RTU1 214 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CHST2Q9Y4C5 530 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PLPP1O14494 284 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ERVK11-1P61568 191 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 RPL22L1Q6P5R6 122 aaKnown RBP9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 FGF13Q92913 245 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TM4SF18Q96CE8 201 aa9.44□□□□□ -0.9
CNTNAP3B-211ENST00000612828 NDUFS8O00217 210 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TMEM255AQ5JRV8 349 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PLEKHB1Q9UF11 243 aaPredicted RBP9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SPINK14Q6IE38 97 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SMIM2Q9BVW6 85 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ICOSLGO75144 302 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PRTN3P24158 256 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CCL7P80098 99 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SLC16A11Q8NCK7 471 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 GLIPR2Q9H4G4 154 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PDFQ9HBH1 243 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 G6PC2Q9NQR9 355 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PLCH1Q4KWH8 1693 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LIMS3P0CW19 117 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LIMS4P0CW20 117 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 HMGA1P17096 107 aaKnown RBP9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PEBP1P30086 187 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms