RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	DEFA6	Q01524	100 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	TESK1	Q15569	626 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	OR51H1	Q8NH63	302 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	GPR146	Q96CH1	333 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	TRBV23-1	A0A0A0MS06	115 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614		A0A1B0GU03	582 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H2BK	O60814	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	TMEM50A	O95807	157 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H2BJ	P06899	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	PSG2	P11465	335 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H2BO	P23527	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	CCKAR	P32238	428 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H2BB	P33778	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H2BD	P58876	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	SELENOV	P59797	346 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H2BC	P62807	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST2H2BE	Q16778	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	MBNL2	Q5VZF2	373 aa	Known RBP	11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	ODF3L1	Q8IXM7	274 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H2BH	Q93079	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H2BN	Q99877	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H2BM	Q99879	126 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	WIPI2	Q9Y4P8	454 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	PKD1L2	Q7Z442	2459 aa		11.64	□□□□□ -0.55
COPS7B-223	ENST00000611614	PTBP3	O95758	552 aa	Known RBP	11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	GRP	P07492	148 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	CD40	P25942	277 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	GLRX	P35754	106 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	RND2	P52198	227 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	STX12	Q86Y82	276 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	C1orf87	Q8N0U7	546 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	ZNF383	Q8NA42	475 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	MBNL3	Q9NUK0	354 aa	Known RBP	11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	DUSP13	Q9UII6	198 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	RNF150	Q9ULK6	438 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	FZR1	Q9UM11	496 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	RNF115	Q9Y4L5	304 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	HEATR1	Q9H583	2144 aa	Known RBP	11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614		A0A0G2JRQ6	117 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	IFNA5	P01569	189 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	IGLV2-14	P01704	120 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST1H1B	P16401	226 aa	Known RBP	11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	KITLG	P21583	273 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	ERVFRD-1	P60508	538 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	HIST3H2BB	Q8N257	126 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	PRR18	Q8N4B5	295 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	CA5BP1	Q8WTZ4	195 aa		11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	CISD1	Q9NZ45	108 aa	Known RBP	11.63	□□□□□ -0.55
COPS7B-223	ENST00000611614	PRR14L	Q5THK1	2151 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	FAM90A27P	A6NNH2	459 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	CST7	O76096	145 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	NXPH3	O95157	252 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	EPHA1	P21709	976 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	CEBPG	P53567	150 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	PAX9	P55771	341 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	SST	P61278	116 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	MZT1	Q08AG7	82 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	ZNF343	Q6P1L6	599 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	VHLL	Q6RSH7	139 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	LSM10	Q969L4	123 aa	Known RBP	11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	COL6A6	A6NMZ7	2263 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	CYB5B	O43169	146 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	HAND1	O96004	215 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	IFNA10	P01566	189 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	OR10D4P	Q8NGN7	298 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	RNASE11	Q8TAA1	199 aa	Known RBP	11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	HES4	Q9HCC6	221 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	PPP1R3C	Q9UQK1	317 aa		11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	RBM7	Q9Y580	266 aa	Known RBP	11.62	□□□□□ -0.55
COPS7B-223	ENST00000611614	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	IGHV3-64D	A0A0J9YX35	117 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	CD200	P41217	278 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	KLF3	P57682	345 aa	Predicted RBP	11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	SPNS3	Q6ZMD2	512 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	RCC1L	Q96I51	464 aa	Known RBP	11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	FAM210B	Q96KR6	192 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	RAB40C	Q96S21	281 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	P2RX4	Q99571	388 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	CTDSP1	Q9GZU7	261 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	RFNG	Q9Y644	331 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	NBAS	A2RRP1	2371 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	CLDN34	H7C241	214 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	CYB5R3	P00387	301 aa	Predicted RBP	11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	IGKV1-39	P01597	117 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	IGKV1D-39	P04432	117 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	CEACAM6	P40199	344 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	C9orf152	Q5JTZ5	239 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	C22orf34	Q6ZV56	151 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	TMEM217	Q8N7C4	229 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	UBALD1	Q8TB05	177 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	MBD3L1	Q8WWY6	194 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	RNASE6	Q93091	150 aa	Known RBP	11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	LIN7C	Q9NUP9	197 aa	Known RBP	11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	OR14J1	Q9UGF5	321 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	KCNS2	Q9ULS6	477 aa		11.61	□□□□□ -0.55
COPS7B-223	ENST00000611614	VSTM5	A8MXK1	200 aa		11.6	□□□□□ -0.55
COPS7B-223	ENST00000611614	MLNR	O43193	412 aa		11.6	□□□□□ -0.55
COPS7B-223	ENST00000611614	GPX4	P36969	197 aa	Predicted RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms