RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 LINC00527Q9UJ94 153 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 RNF150Q9ULK6 438 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 RBMX2Q9Y388 322 aaKnown RBP6.86□□□□□ -1.31
SNCA-212ENST00000611107 OR2W1Q9Y3N9 320 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 A0A1W2PRX2 142 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 G3V4G9 280 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 H0YJW9 148 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 J3QRK9 145 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 M0QYG6 137 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 M0R1X1 148 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 GSTZ1O43708 216 aaPredicted RBP6.85□□□□□ -1.31
SNCA-212ENST00000611107 OR2F2O95006 317 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 PPYP01298 95 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 PMP2P02689 132 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 PRB2P02812 416 aaPredicted RBP6.85□□□□□ -1.31
SNCA-212ENST00000611107 CT45A6P0DMU7 189 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 CT45A5P0DMU8 189 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 CT45A7P0DMV0 189 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 CD1BP29016 333 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 S100A5P33763 92 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 ETV6P41212 452 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 MRPS10P82664 201 aaKnown RBP6.85□□□□□ -1.31
SNCA-212ENST00000611107 EIF4EBP1Q13541 118 aaPredicted RBP6.85□□□□□ -1.31
SNCA-212ENST00000611107 HES1Q14469 280 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 C16orf82Q7Z2V1 217 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 THNSL2Q86YJ6 484 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 ZNF645Q8N7E2 425 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 C5orf56Q8N8D9 126 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 ZNF383Q8NA42 475 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 DRAXINQ8NBI3 349 aaPredicted RBP6.85□□□□□ -1.31
SNCA-212ENST00000611107 OR4D10Q8NGI6 311 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 C15orf40Q8WUR7 153 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 EAF1Q96JC9 268 aaPredicted RBP6.85□□□□□ -1.31
SNCA-212ENST00000611107 S1PR3Q99500 378 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 PRSS22Q9GZN4 317 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 PLSCR3Q9NRY6 295 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 RABL2AQ9UBK7 228 aaPredicted RBP6.85□□□□□ -1.31
SNCA-212ENST00000611107 ZNF221Q9UK13 617 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 PITPNC1Q9UKF7 332 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 RABL2BQ9UNT1 228 aa6.85□□□□□ -1.31
SNCA-212ENST00000611107 FABP12A6NFH5 140 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 OR5H14A6NHG9 310 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 LINC00473A8K010 186 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 M0QZ24 198 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 CD74P04233 296 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 CD3DP04234 171 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 TMEM11P17152 192 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 CNTFRP26992 372 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 VDAC2P45880 294 aaPredicted RBP6.84□□□□□ -1.31
SNCA-212ENST00000611107 LUMP51884 338 aaPredicted RBP6.84□□□□□ -1.31
SNCA-212ENST00000611107 F2RL1P55085 397 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 FXYD4P59646 89 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 CD83Q01151 205 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 SSBP1Q04837 148 aaKnown RBP6.84□□□□□ -1.31
SNCA-212ENST00000611107 ACTBL2Q562R1 376 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 VAX1Q5SQQ9 334 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 FAAP20Q6NZ36 180 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 C11orf88Q6PI97 169 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 TMEM17Q86X19 198 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 Q8N9W7 124 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 OR5AN1Q8NGI8 311 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 SECTM1Q8WVN6 248 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 GIMAP1Q8WWP7 306 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 FCAMRQ8WWV6 532 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 DDB2Q92466 427 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 MOB3AQ96BX8 217 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 ZNF2Q9BSG1 426 aaPredicted RBP6.84□□□□□ -1.31
SNCA-212ENST00000611107 TINAGL1Q9GZM7 467 aaPredicted RBP6.84□□□□□ -1.31
SNCA-212ENST00000611107 SRRQ9GZT4 340 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 GHITMQ9H3K2 345 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 RAB18Q9NP72 206 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 ZNF107Q9UII5 783 aaPredicted RBP6.84□□□□□ -1.31
SNCA-212ENST00000611107 GAB2Q9UQC2 676 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 MOB4Q9Y3A3 225 aa6.84□□□□□ -1.31
SNCA-212ENST00000611107 FBXO24O75426 580 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 RBBP9O75884 186 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 MOSP00540 346 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 IGKV1-16P04430 117 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 CSF1P09603 554 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 FAM106CPP0CH98 169 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 TBPP20226 339 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 DUTP33316 252 aaKnown RBP6.83□□□□□ -1.32
SNCA-212ENST00000611107 TAS2R19P59542 299 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 HERV-K104P61576 105 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 RNASE10Q5GAN6 216 aaKnown RBP6.83□□□□□ -1.32
SNCA-212ENST00000611107 C9orf152Q5JTZ5 239 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 SPANXN2Q5MJ10 180 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 ZNF818PQ6ZRF7 136 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 LCNL1Q6ZST4 164 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 ZNF329Q86UD4 541 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 LHFPL1Q86WI0 220 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 MFSD4AQ8N468 514 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 FAM71E2Q8N5Q1 922 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 TMEM229BQ8NBD8 167 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 OR5AU1Q8NGC0 362 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 OR4C16Q8NGL9 310 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 OR2T10Q8NGZ9 312 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 GPHA2Q96T91 129 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 SDHCQ99643 169 aaPredicted RBP6.83□□□□□ -1.32
SNCA-212ENST00000611107 HSPB9Q9BQS6 159 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms