RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 A0A1W2PP11 408 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 SRSF12Q8WXF0 261 aaKnown RBP11.31□□□□□ -0.6
USP6NL-205ENST00000609104 PSG4Q00888 419 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 ZNF273Q14593 569 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 ZNF721Q8TF20 911 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 ZDHHC8Q9ULC8 765 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 UCP2P55851 309 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 CX3CL1P78423 397 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 A0A0U1RQV5 110 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 FAM106CPP0CH98 169 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 FOXL2P58012 376 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 MBNL2Q5VZF2 373 aaKnown RBP11.31□□□□□ -0.6
USP6NL-205ENST00000609104 DIDO1Q9BTC0 2240 aaKnown RBP11.31□□□□□ -0.6
USP6NL-205ENST00000609104 GAPDHP04406 335 aaKnown RBP11.31□□□□□ -0.6
USP6NL-205ENST00000609104 HSPB1P04792 205 aaKnown RBP11.31□□□□□ -0.6
USP6NL-205ENST00000609104 TMEM252Q8N6L7 170 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 MEF2BQ02080 365 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-205ENST00000609104 ZNF660Q6AZW8 331 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-205ENST00000609104 TAF15Q92804 592 aaKnown RBP eCLIP11.31□□□□□ -0.6
USP6NL-205ENST00000609104 ANK1P16157 1881 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 TSPAN13O95857 204 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 SNAI3Q3KNW1 292 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 OR2H2O95918 312 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 AGAP20933 346 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 KIAA2026Q5HYC2 2103 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 BIVMQ86UB2 503 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 H0YL77 283 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 MPDU1O75352 247 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 PUSL1Q8N0Z8 303 aaKnown RBP11.3□□□□□ -0.6
USP6NL-205ENST00000609104 MRAP2Q96G30 205 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 DDA1Q9BW61 102 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 TMEM56-RWDD3S4R434 201 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 ZIC3O60481 467 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 MT-ND6P03923 174 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 SRIP30626 198 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 OR4B1Q8NGF8 309 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 ANOS1P23352 680 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 JOSD1Q15040 202 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-205ENST00000609104 ISXQ2M1V0 245 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 TMEM52Q8NDY8 209 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 MRPS18AQ9NVS2 196 aaKnown RBP11.3□□□□□ -0.6
USP6NL-205ENST00000609104 HLA-DQB1P01920 261 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 C1QAP02745 245 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 TFF2Q03403 129 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 PPP1R3EQ9H7J1 279 aa11.3□□□□□ -0.6
USP6NL-205ENST00000609104 IFITM3Q01628 133 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 FGFRL1Q8N441 504 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 DDB2Q92466 427 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 CHRNA10Q9GZZ6 450 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 MEIG1Q5JSS6 88 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 OR4C13Q8NGP0 309 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 FREM3P0C091 2139 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 A0A0B4J293 547 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 DLL1O00548 723 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 WNT9BO14905 357 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 DNAJC4Q9NNZ3 241 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 TUBD1Q9UJT1 453 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 PAPPAQ13219 1627 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 TTTY12Q9BZ98 90 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 LDLRAD4O15165 306 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 MBD1Q9UIS9 605 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-205ENST00000609104 A0A1W2PS18 150 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 SLC25A17O43808 307 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 DDTP30046 118 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 SELENOHQ8IZQ5 122 aaKnown RBP11.29□□□□□ -0.6
USP6NL-205ENST00000609104 SPINT1O43278 529 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 VKORC1L1Q8N0U8 176 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 OR10S1Q8NGN2 331 aa11.29□□□□□ -0.6
USP6NL-205ENST00000609104 PGLYRP1O75594 196 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-205ENST00000609104 HLA-DRB1P01911 266 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 LEAP2Q969E1 77 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 TMEM160Q9NX00 188 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 RPL8P62917 257 aaKnown RBP11.28□□□□□ -0.6
USP6NL-205ENST00000609104 ALX4Q9H161 411 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-205ENST00000609104 IGHV3-48P01763 117 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 CRYBB3P26998 211 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 OR4D5Q8NGN0 318 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 NMBP08949 121 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 LEMD1Q68G75 181 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 ZNF826PQ6ZT77 177 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 TMEM45BQ96B21 275 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 CBLN4Q9NTU7 201 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 PRF1P14222 555 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 ZP4Q12836 540 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 OR51M1Q9H341 326 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 UNC119Q13432 240 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 TMEM171Q8WVE6 324 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 OPN3Q9H1Y3 402 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-205ENST00000609104 P2RY4P51582 365 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 SFRP2Q96HF1 295 aa11.28□□□□□ -0.6
USP6NL-205ENST00000609104 IL9P15248 144 aa11.27□□□□□ -0.6
USP6NL-205ENST00000609104 MC5RP33032 325 aa11.27□□□□□ -0.6
USP6NL-205ENST00000609104 ZNF418Q8TF45 676 aaPredicted RBP11.27□□□□□ -0.6
USP6NL-205ENST00000609104 QTRT1Q9BXR0 403 aaKnown RBP11.27□□□□□ -0.6
USP6NL-205ENST00000609104 GEMIN7Q9H840 131 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms