RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 EPHA1P21709 976 aa17.66■□□□□ 0.42
USP6NL-204ENST00000606752 ID3Q02535 119 aa17.66■□□□□ 0.42
USP6NL-204ENST00000606752 Q6ZRM9 215 aa17.66■□□□□ 0.42
USP6NL-204ENST00000606752 ZNF596Q8TC21 504 aa17.66■□□□□ 0.42
USP6NL-204ENST00000606752 ADTRPQ96IZ2 230 aa17.66■□□□□ 0.42
USP6NL-204ENST00000606752 SSBP3Q9BWW4 388 aaPredicted RBP17.66■□□□□ 0.42
USP6NL-204ENST00000606752 MMP24Q9Y5R2 645 aa17.66■□□□□ 0.42
USP6NL-204ENST00000606752 E5RGE8 158 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 FCGR3BO75015 233 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 KRASP01116 189 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 IGHV4-39P01824 125 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 KIR2DS2P43631 304 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 THBS3P49746 956 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 CXorf66Q5JRM2 361 aaPredicted RBP17.65■□□□□ 0.42
USP6NL-204ENST00000606752 TEX261Q6UWH6 196 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 ZNF525Q8N782 197 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 DDB2Q92466 427 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 AQP10Q96PS8 301 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 NSG2Q9Y328 171 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 U3KQ87 197 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 A1L4Q6 167 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 C22orf46C9J442 243 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 J3QR06 171 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 LIPFP07098 398 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 IZUMO4Q1ZYL8 232 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 ABHD12Q8N2K0 398 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 TMEM133Q9H2Q1 129 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 PLEKHA2Q9HB19 425 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 ZNRD1Q9P1U0 126 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 CACNG5Q9UF02 275 aa17.65■□□□□ 0.42
USP6NL-204ENST00000606752 LOC105371242A0A075B767 164 aa17.64■□□□□ 0.41
USP6NL-204ENST00000606752 HPRT1P00492 218 aa17.64■□□□□ 0.41
USP6NL-204ENST00000606752 G6PCP35575 357 aa17.64■□□□□ 0.41
USP6NL-204ENST00000606752 ZNF767PQ75MW2 155 aa17.64■□□□□ 0.41
USP6NL-204ENST00000606752 OR9G1Q8NH87 305 aa17.64■□□□□ 0.41
USP6NL-204ENST00000606752 KMT2BQ9UMN6 2715 aaPredicted RBP17.64■□□□□ 0.41
USP6NL-204ENST00000606752 FAM208BQ5VWN6 2430 aa17.64■□□□□ 0.41
USP6NL-204ENST00000606752 hCG_1809904A0A1W2PP81 198 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 A0A1W2PPE2 198 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 KANTRA0A1W2PQU2 76 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 A0A1W2PR64 198 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 A0A1W2PRV1 198 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 MSGN1A6NI15 193 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 P0C879 139 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 DMBX1Q8NFW5 382 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 RCL1Q9Y2P8 373 aaKnown RBP17.63■□□□□ 0.41
USP6NL-204ENST00000606752 BCL2L11O43521 198 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 HKR1P10072 659 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 PDLIM4P50479 330 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 POLR2GP62487 172 aaKnown RBP eCLIP17.63■□□□□ 0.41
USP6NL-204ENST00000606752 ZNF833PQ6ZTB9 187 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 SLC51BQ86UW2 128 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 ZNF383Q8NA42 475 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 ZNF680Q8NEM1 530 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 OR10X1Q8NGY0 326 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 COA4Q9NYJ1 87 aa17.63■□□□□ 0.41
USP6NL-204ENST00000606752 RPL12P30050 165 aaKnown RBP17.62■□□□□ 0.41
USP6NL-204ENST00000606752 BPESC1Q9GZL8 116 aa17.62■□□□□ 0.41
USP6NL-204ENST00000606752 KIAA1324LA8MWY0 1029 aaPredicted RBP17.61■□□□□ 0.41
USP6NL-204ENST00000606752 IGHV2-5P01817 119 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 CT45A6P0DMU7 189 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 CT45A5P0DMU8 189 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 CT45A7P0DMV0 189 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 PVALBP20472 110 aaPredicted RBP17.61■□□□□ 0.41
USP6NL-204ENST00000606752 P2RY1P47900 373 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 OR4S2Q8NH73 311 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 TNFRSF14Q92956 283 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 TMEM186Q96B77 213 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 R3HDM4Q96D70 268 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 ARPC5LQ9BPX5 153 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 C11orf1Q9H5F2 150 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 LRRK2Q5S007 2527 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 MARCH11A6NNE9 402 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 FAM71F2Q6NXP2 309 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 H2BFWTQ7Z2G1 175 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 MAGT1Q9H0U3 335 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 ONECUT1Q9UBC0 465 aa17.61■□□□□ 0.41
USP6NL-204ENST00000606752 WRBO00258 174 aa17.6■□□□□ 0.41
USP6NL-204ENST00000606752 TOR1AO14656 332 aa17.6■□□□□ 0.41
USP6NL-204ENST00000606752 CFDP00746 253 aaPredicted RBP17.6■□□□□ 0.41
USP6NL-204ENST00000606752 IFNA7P01567 189 aa17.6■□□□□ 0.41
USP6NL-204ENST00000606752 MMP9P14780 707 aa17.6■□□□□ 0.41
USP6NL-204ENST00000606752 ZNF137PP52743 207 aa17.6■□□□□ 0.41
USP6NL-204ENST00000606752 GPR157Q5UAW9 335 aa17.6■□□□□ 0.41
USP6NL-204ENST00000606752 ZC4H2Q9NQZ6 224 aa17.6■□□□□ 0.41
USP6NL-204ENST00000606752 IGHV2-26A0A0B4J1V2 119 aa17.59■□□□□ 0.41
USP6NL-204ENST00000606752 CHST1O43916 411 aa17.59■□□□□ 0.41
USP6NL-204ENST00000606752 SSSCA1O60232 199 aa17.59■□□□□ 0.41
USP6NL-204ENST00000606752 NXPH3O95157 252 aa17.59■□□□□ 0.41
USP6NL-204ENST00000606752 PRRX1P54821 245 aa17.59■□□□□ 0.41
USP6NL-204ENST00000606752 ZNF295-AS1Q8N0V1 137 aa17.59■□□□□ 0.41
USP6NL-204ENST00000606752 ST6GALNAC6Q969X2 333 aa17.59■□□□□ 0.41
USP6NL-204ENST00000606752 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.59■□□□□ 0.41
USP6NL-204ENST00000606752 CHD6Q8TD26 2715 aa17.59■□□□□ 0.41
USP6NL-204ENST00000606752 M0R1W7 72 aa17.58■□□□□ 0.41
USP6NL-204ENST00000606752 NQO2P16083 231 aa17.58■□□□□ 0.41
USP6NL-204ENST00000606752 VAMP2P63027 116 aa17.58■□□□□ 0.41
USP6NL-204ENST00000606752 MIDNQ504T8 468 aa17.58■□□□□ 0.41
USP6NL-204ENST00000606752 CLEC7AQ9BXN2 247 aa17.58■□□□□ 0.41
USP6NL-204ENST00000606752 BARX1Q9HBU1 254 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms