RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 OR2S2Q9NQN1 319 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 NUDT15Q9NV35 164 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 RDH8Q9NYR8 311 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 GAB2Q9UQC2 676 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 SIGLEC9Q9Y336 463 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 A0A1W2PPE3 182 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 OR5H8P0DN80 308 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 NFYAP23511 347 aaPredicted RBP7.02□□□□□ -1.29
TRIM28-214ENST00000600840 ZBTB25P24278 435 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 COX7A1P24310 79 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 NFYBP25208 207 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 HRH1P35367 487 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 CD83Q01151 205 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 EIF4EBP1Q13541 118 aaPredicted RBP7.02□□□□□ -1.29
TRIM28-214ENST00000600840 DIAPH2-AS1Q14236 149 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 RBMS2Q15434 407 aaKnown RBP7.02□□□□□ -1.29
TRIM28-214ENST00000600840 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 RNASE12Q5GAN4 147 aaKnown RBP7.02□□□□□ -1.29
TRIM28-214ENST00000600840 AADACL3Q5VUY0 350 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 OR10V1Q8NGI7 309 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 FAM110DQ8TAY7 271 aaPredicted RBP7.02□□□□□ -1.29
TRIM28-214ENST00000600840 PIFOQ8TCI5 191 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 IL1F10Q8WWZ1 152 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 C5orf30Q96GV9 206 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 TINAGL1Q9GZM7 467 aaPredicted RBP7.02□□□□□ -1.29
TRIM28-214ENST00000600840 C20orf85Q9H1P6 137 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 C16orf95Q9H693 158 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 RAB9BQ9NP90 201 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 SLC23A1Q9UHI7 598 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 VPREB3Q9UKI3 123 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 FAM96BQ9Y3D0 163 aa7.02□□□□□ -1.29
TRIM28-214ENST00000600840 IGKV1D-13A0A0B4J2D9 117 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 ZNF736B4DX44 427 aaPredicted RBP7.01□□□□□ -1.29
TRIM28-214ENST00000600840 H3BUX3 64 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 M0QYG6 137 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 TIMM23O14925 209 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 BET1O15155 118 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 TSPAN9O75954 239 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 NDUFB6O95139 128 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 PMP2P02689 132 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 FBP1P09467 338 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 SULT1A3P0DMM9 295 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 SULT1A4P0DMN0 295 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 IGKV1-13P0DP09 117 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 TBPP20226 339 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 RPL15P61313 204 aaKnown RBP7.01□□□□□ -1.29
TRIM28-214ENST00000600840 HABP2Q14520 560 aaPredicted RBP7.01□□□□□ -1.29
TRIM28-214ENST00000600840 LY6EQ16553 131 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 MINOS1Q5TGZ0 78 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 STEAP1BQ6NZ63 245 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 OR10J5Q8NHC4 309 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 MALSU1Q96EH3 234 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 SLC25A21Q9BQT8 299 aaPredicted RBP7.01□□□□□ -1.29
TRIM28-214ENST00000600840 ALX4Q9H161 411 aaPredicted RBP7.01□□□□□ -1.29
TRIM28-214ENST00000600840 HRASLSQ9HDD0 168 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 IFT46Q9NQC8 304 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 NECAP2Q9NVZ3 263 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 DPM3Q9P2X0 92 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 GNG12Q9UBI6 72 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 SCP2D1Q9UJQ7 156 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 OR2W1Q9Y3N9 320 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 TBL2Q9Y4P3 447 aaKnown RBP7.01□□□□□ -1.29
TRIM28-214ENST00000600840 MINOS1-NBL1R4GNA1 71 aa7.01□□□□□ -1.29
TRIM28-214ENST00000600840 TET2Q6N021 2002 aaPredicted RBP7□□□□□ -1.29
TRIM28-214ENST00000600840 OR5H14A6NHG9 310 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 FAM90A9PA6NNJ1 464 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 ST8SIA5O15466 376 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 CREBL2O60519 120 aaPredicted RBP7□□□□□ -1.29
TRIM28-214ENST00000600840 RGS11O94810 467 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 PPYP01298 95 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 ARG1P05089 322 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 OR8U9P0C7N5 309 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 AKAIN1P0CW23 69 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 AADACP22760 399 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 HTR1DP28221 377 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 FCGR2CP31995 323 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 GNG10P50151 68 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 PRRX1P54821 245 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 TAS2R46P59540 309 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 TAS2R19P59542 299 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 RAP2BP61225 183 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 IFITM2Q01629 132 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 MEF2DQ14814 521 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 TPTE2P1Q5T6R2 138 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 DHRS7BQ6IAN0 325 aaPredicted RBP7□□□□□ -1.29
TRIM28-214ENST00000600840 ZNF833PQ6ZTB9 187 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 OR4C16Q8NGL9 310 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 OR13C8Q8NGS7 320 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 OR5H2Q8NGV7 314 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 OR8U1Q8NH10 309 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 CFHR4Q92496 578 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 MOB3AQ96BX8 217 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 FYTTD1Q96QD9 318 aaKnown RBP7□□□□□ -1.29
TRIM28-214ENST00000600840 SSX3Q99909 188 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 ABHD14AQ9BUJ0 271 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 SLC2A8Q9NY64 477 aa7□□□□□ -1.29
TRIM28-214ENST00000600840 SAA2-SAA4A0A096LPE2 208 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 A0A1W2PPI3 338 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 TOR1AO14656 332 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 SSNA1O43805 119 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms