RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 ZNF66Q6ZN08 573 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 ZFAND1Q8TCF1 268 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 ZNF251Q9BRH9 671 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 CCDC32Q9BV29 185 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 CHIAQ9BZP6 476 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 ESM1Q9NQ30 184 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 AKIP1Q9NQ31 210 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 CCL28Q9NRJ3 127 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 C1RLQ9NZP8 487 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 STAB1Q9NY15 2570 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 FAM90A9PA6NNJ1 464 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 RNF212BA8MTL3 300 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 M0QZK8 103 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 IGKV1D-33P01593 117 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 IGKV1-33P01594 117 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 CD24P25063 80 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 CATR1Q13166 79 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 HABP2Q14520 560 aaPredicted RBP13.41□□□□□ -0.26
USHBP1-210ENST00000600286 ABCA11PQ4W5N1 156 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 SLC38A6Q8IZM9 456 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 MFSD4AQ8N468 514 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 POC5Q8NA72 575 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 DRAXINQ8NBI3 349 aaPredicted RBP13.41□□□□□ -0.26
USHBP1-210ENST00000600286 OR4C16Q8NGL9 310 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 PIFOQ8TCI5 191 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 CFHR4Q92496 578 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 WASHC3Q9Y3C0 194 aa13.41□□□□□ -0.26
USHBP1-210ENST00000600286 A6NDX4 124 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 NAP1L6A6NFF2 107 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 GPR31O00270 319 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 GPR137BO60478 399 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 OR2F2O95006 317 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 KLF9Q13886 244 aaPredicted RBP13.4□□□□□ -0.26
USHBP1-210ENST00000600286 HNF4GQ14541 408 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 BAK1Q16611 211 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 DHRS7BQ6IAN0 325 aaPredicted RBP13.4□□□□□ -0.26
USHBP1-210ENST00000600286 OR8H1Q8NGG4 311 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 OR5AN1Q8NGI8 311 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 TCTEX1D2Q8WW35 142 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 TRIM63Q969Q1 353 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 C7orf50Q9BRJ6 194 aaKnown RBP13.4□□□□□ -0.26
USHBP1-210ENST00000600286 SLC35D1Q9NTN3 355 aa13.4□□□□□ -0.26
USHBP1-210ENST00000600286 NCBP2LA6PVI3 153 aaKnown RBP13.39□□□□□ -0.27
USHBP1-210ENST00000600286 IL7P13232 177 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 GNRHRP30968 328 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 DUTP33316 252 aaKnown RBP13.39□□□□□ -0.27
USHBP1-210ENST00000600286 KIR2DS2P43631 304 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 EBI3Q14213 229 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 GLDNQ6ZMI3 551 aaPredicted RBP13.39□□□□□ -0.27
USHBP1-210ENST00000600286 KCTD9Q7L273 389 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 TMEM219Q86XT9 240 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 PDPNQ86YL7 162 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 BVESQ8NE79 360 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 OR4D10Q8NGI6 311 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 OR51S1Q8NGJ8 323 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 FLYWCH2Q96CP2 140 aaKnown RBP13.39□□□□□ -0.27
USHBP1-210ENST00000600286 ZNF486Q96H40 463 aaPredicted RBP13.39□□□□□ -0.27
USHBP1-210ENST00000600286 EAF1Q96JC9 268 aaPredicted RBP13.39□□□□□ -0.27
USHBP1-210ENST00000600286 RBM14Q96PK6 669 aaKnown RBP13.39□□□□□ -0.27
USHBP1-210ENST00000600286 RNF5Q99942 180 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 SLC25A33Q9BSK2 321 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 NPFFR1Q9GZQ6 430 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 HRASLSQ9HDD0 168 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 KIAA1456Q9P272 454 aa13.39□□□□□ -0.27
USHBP1-210ENST00000600286 C14orf166Q9Y224 244 aaKnown RBP13.39□□□□□ -0.27
USHBP1-210ENST00000600286 FAM181BA6NEQ2 426 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 H0YJW9 148 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 PROP1O75360 226 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 RPS16P62249 146 aaKnown RBP13.38□□□□□ -0.27
USHBP1-210ENST00000600286 SURF2Q15527 256 aaPredicted RBP13.38□□□□□ -0.27
USHBP1-210ENST00000600286 IDO2Q6ZQW0 420 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 ZNF818PQ6ZRF7 136 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 CCDC71LQ8N9Z2 235 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 OR4C13Q8NGP0 309 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 CD300LFQ8TDQ1 290 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 TMEM158Q8WZ71 300 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 TSNAXQ99598 290 aaKnown RBP13.38□□□□□ -0.27
USHBP1-210ENST00000600286 AIFM2Q9BRQ8 373 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 RSRP1Q9BUV0 290 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 SLC2A8Q9NY64 477 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 MOB4Q9Y3A3 225 aa13.38□□□□□ -0.27
USHBP1-210ENST00000600286 LINC00854A0A1B0GVQ3 168 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 TNFSF12O43508 249 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 ZNF735P0CB33 412 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 LGALS7P47929 136 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 ARSJQ5FYB0 599 aaPredicted RBP13.37□□□□□ -0.27
USHBP1-210ENST00000600286 AADACL3Q5VUY0 350 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 FAAP20Q6NZ36 180 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 C11orf88Q6PI97 169 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 LHFPL1Q86WI0 220 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 TCTEX1D1Q8N7M0 179 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 ZNF383Q8NA42 475 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 RASL11BQ9BPW5 248 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 FXYD6Q9H0Q3 95 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 COPZ2Q9P299 210 aa13.37□□□□□ -0.27
USHBP1-210ENST00000600286 MMDQ15546 238 aa13.36□□□□□ -0.27
USHBP1-210ENST00000600286 PHLDA2Q53GA4 152 aa13.36□□□□□ -0.27
USHBP1-210ENST00000600286 CCBE1Q6UXH8 406 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-210ENST00000600286 OR4S2Q8NH73 311 aa13.36□□□□□ -0.27
USHBP1-210ENST00000600286 MARCH1Q8TCQ1 289 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms