RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 LSM4Q9Y4Z0 139 aaKnown RBP12.26□□□□□ -0.45
VRK3-221ENST00000600284 MFNGO00587 321 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 NHLRC4P0CG21 123 aaPredicted RBP12.25□□□□□ -0.45
VRK3-221ENST00000600284 HIST1H1DP16402 221 aaKnown RBP12.25□□□□□ -0.45
VRK3-221ENST00000600284 ECI1P42126 302 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 MOGAT2Q3SYC2 334 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 ACTBL2Q562R1 376 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 ASPHD1Q5U4P2 390 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 UBE2UQ5VVX9 321 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 Q6ZS49 121 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 ZNF429Q86V71 674 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 ABHD5Q8WTS1 349 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 OR5B12Q96R08 314 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 SLA2Q9H6Q3 261 aa12.25□□□□□ -0.45
VRK3-221ENST00000600284 LINC01619G3V211 115 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 M0R1X1 148 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 ARPC1BO15143 372 aaKnown RBP12.24□□□□□ -0.45
VRK3-221ENST00000600284 BET1O15155 118 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 CA2P00918 260 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 LGALS1P09382 135 aaKnown RBP12.24□□□□□ -0.45
VRK3-221ENST00000600284 OR8U9P0C7N5 309 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 GSTT2P0CG29 244 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 GSTT2BP0CG30 244 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 GNB3P16520 340 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 FGF9P31371 208 aaPredicted RBP12.24□□□□□ -0.45
VRK3-221ENST00000600284 IGSF11Q5DX21 431 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 UNQ5815/PRO19632Q6UWF5 114 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 LFNGQ8NES3 379 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 CLCC1Q96S66 551 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 YTHDF1Q9BYJ9 559 aaKnown RBP12.24□□□□□ -0.45
VRK3-221ENST00000600284 TPSG1Q9NRR2 321 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 SLC35D1Q9NTN3 355 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 ZNF256Q9Y2P7 627 aaPredicted RBP12.24□□□□□ -0.45
VRK3-221ENST00000600284 A3GALT2U3KPV4 340 aa12.24□□□□□ -0.45
VRK3-221ENST00000600284 DNAH9Q9NYC9 4486 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 OVOL1O14753 267 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 TALDO1P37837 337 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 LINC00205P59089 165 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 CBX3Q13185 183 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 C22orf42Q6IC83 251 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 C11orf87Q6NUJ2 197 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 DCUN1D4Q92564 292 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 FCGR1BQ92637 280 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 ARPC1AQ92747 370 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 RHOVQ96L33 236 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 TMEM68Q96MH6 324 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 OR2D2Q9H210 308 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.23□□□□□ -0.45
VRK3-221ENST00000600284 SDHAF2Q9NX18 166 aa12.23□□□□□ -0.45
VRK3-221ENST00000600284 H3BUA1 57 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 SLC25A17O43808 307 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 RRASP10301 218 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 DTYMKP23919 212 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 ARFRP1Q13795 201 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 FXYD3Q14802 87 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 TMEM177Q53S58 311 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 TPRA1Q86W33 373 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 SPARTQ8N0X7 666 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 DLX4Q92988 240 aaPredicted RBP12.22□□□□□ -0.45
VRK3-221ENST00000600284 PRR25Q96S07 402 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 GINS4Q9BRT9 223 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 FAM103A1Q9BTL3 118 aaKnown RBP12.22□□□□□ -0.45
VRK3-221ENST00000600284 Q9H521 79 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 ZNF230Q9UIE0 474 aaPredicted RBP12.22□□□□□ -0.45
VRK3-221ENST00000600284 COL7A1Q02388 2944 aa12.22□□□□□ -0.45
VRK3-221ENST00000600284 A0A075B6Q4 140 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 NOTOA8MTQ0 251 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 ATP6V1G2O95670 118 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 IGLV2-23P01705 113 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 HSPB1P04792 205 aaKnown RBP12.21□□□□□ -0.45
VRK3-221ENST00000600284 CRYGBP07316 175 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 RTL8BQ17RB0 113 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 NR2C2APQ86WQ0 139 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 ADTRPQ96IZ2 230 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 ALX4Q9H161 411 aaPredicted RBP12.21□□□□□ -0.45
VRK3-221ENST00000600284 ATG5Q9H1Y0 275 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 TXNL4BQ9NX01 149 aaKnown RBP12.21□□□□□ -0.45
VRK3-221ENST00000600284 STUB1Q9UNE7 303 aa12.21□□□□□ -0.45
VRK3-221ENST00000600284 RBM7Q9Y580 266 aaKnown RBP12.21□□□□□ -0.45
VRK3-221ENST00000600284 A0A0B4J203 849 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 SCGNO76038 276 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 CNIH1O95406 144 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 BRI3O95415 125 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 CTXN2P0C2S0 81 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 TPPP2P59282 170 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 CDNFQ49AH0 187 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
VRK3-221ENST00000600284 CASTOR1Q8WTX7 329 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 MAFIPQ8WZ33 124 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 HARBI1Q96MB7 349 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 WWC2-AS2Q96NR7 200 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 MS4A10Q96PG2 267 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 DCSTAMPQ9H295 470 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 SSR3Q9UNL2 185 aa12.2□□□□□ -0.46
VRK3-221ENST00000600284 IGHV4OR15-8A0A075B7B6 117 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 A0A087WW49 117 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 A0A0G2JLM5 398 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 SHOXO15266 292 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 SAP30O75446 220 aa12.19□□□□□ -0.46
VRK3-221ENST00000600284 TRGV3P03979 118 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms