RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 ATP5G2Q06055 141 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 DEFB135Q30KP9 77 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 ZNF57Q68EA5 555 aaPredicted RBP7.56□□□□□ -1.2
TRIM28-210ENST00000597618 XAF1Q6GPH4 301 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 TMEM61Q8N0U2 210 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 CCDC197Q8NCU1 140 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 KCNG3Q8TAE7 436 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 SMIM19Q96E16 107 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 CENPNQ96H22 339 aaPredicted RBP7.56□□□□□ -1.2
TRIM28-210ENST00000597618 Q96MT0 163 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 NEDD4LQ96PU5 975 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 C11orf54Q9H0W9 315 aaPredicted RBP7.56□□□□□ -1.2
TRIM28-210ENST00000597618 CHMP1AQ9HD42 196 aaPredicted RBP7.56□□□□□ -1.2
TRIM28-210ENST00000597618 AKIP1Q9NQ31 210 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 ZNF221Q9UK13 617 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 TRAV8-7A0A075B6U6 113 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 TRBV5-5A0A0J9YX44 114 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 SAC3D1A6NKF1 404 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 LGALS9O00182 355 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 UBE2CO00762 179 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 MPPED1O15442 326 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 NAPSAO96009 420 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 CRYGBP07316 175 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 LIMS3P0CW19 117 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 LIMS4P0CW20 117 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 APELAP0DMC3 54 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 EDN2P20800 178 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 ZBTB25P24278 435 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 CEACAM6P40199 344 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 Q499Y3 187 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 ZNF880Q6PDB4 577 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 OR52I1Q8NGK6 324 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 OR13C5Q8NGS8 318 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 SETD6Q8TBK2 473 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 FAM46BQ96A09 425 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 PTX4Q96A99 478 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 HARBI1Q96MB7 349 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 AMBNQ9NP70 447 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 SLC35D1Q9NTN3 355 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 GHRLQ9UBU3 117 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 AASSQ9UDR5 926 aa7.55□□□□□ -1.2
TRIM28-210ENST00000597618 TRBV9A0A0B4J1U6 114 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 M0R1X1 148 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 GGCTO75223 188 aaKnown RBP7.54□□□□□ -1.2
TRIM28-210ENST00000597618 PROP1O75360 226 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 ALPLP05186 524 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 GABRB1P18505 474 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 CBLN1P23435 193 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 LINC00205P59089 165 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 PRR20EP86478 221 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 PRR20CP86479 221 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 PRR20DP86480 221 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 PRR20BP86481 221 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 PRR20AP86496 221 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 CBX3Q13185 183 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 TM4SF20Q53R12 229 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 YIF1BQ5BJH7 314 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 GLT8D1Q68CQ7 371 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 TMPRSS11AQ6ZMR5 421 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 LINC00336Q6ZUF6 198 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 NKAIN3Q8N8D7 197 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.54□□□□□ -1.2
TRIM28-210ENST00000597618 NECAP1Q8NC96 275 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 CACNG8Q8WXS5 425 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 RNF183Q96D59 192 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 UQCC2Q9BRT2 126 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 FAAP24Q9BTP7 215 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 MRPS18AQ9NVS2 196 aaKnown RBP7.54□□□□□ -1.2
TRIM28-210ENST00000597618 OR1A1Q9P1Q5 309 aa7.54□□□□□ -1.2
TRIM28-210ENST00000597618 EXOSC1Q9Y3B2 195 aaKnown RBP7.54□□□□□ -1.2
TRIM28-210ENST00000597618 RPL36Q9Y3U8 105 aaKnown RBP7.54□□□□□ -1.2
TRIM28-210ENST00000597618 DNAH17Q9UFH2 4485 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 TRBV5-7A0A0A0MS05 114 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 KIR2DL5BA0A0G2JN68 375 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 KIR2DL5BA0A0G2JPC4 375 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 PPP5D1E7EU14 171 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 OGG1O15527 345 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 SCAF4O95104 1147 aaKnown RBP7.53□□□□□ -1.2
TRIM28-210ENST00000597618 HLA-AP01891 365 aaKnown RBP7.53□□□□□ -1.2
TRIM28-210ENST00000597618 PRH1P02810 166 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 TCTAP57738 103 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 HLA-DRB3P79483 266 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 ZNF45Q02386 682 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 C15orf32Q32M92 178 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 C6orf201Q7Z4U5 140 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 GPHB5Q86YW7 130 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 KIR2DL5AQ8N109 375 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 OR1L6Q8NGR2 347 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 KIR2DL5BQ8NHK3 375 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 SRSF12Q8WXF0 261 aaKnown RBP7.53□□□□□ -1.2
TRIM28-210ENST00000597618 MFFQ9GZY8 342 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 RIMS4Q9H426 269 aaPredicted RBP7.53□□□□□ -1.2
TRIM28-210ENST00000597618 MLXQ9UH92 298 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 MGAT4AQ9UM21 535 aa7.53□□□□□ -1.2
TRIM28-210ENST00000597618 TRBV6-6A0A0A6YYG2 114 aa7.52□□□□□ -1.21
TRIM28-210ENST00000597618 TRAV25A0A0B4J276 109 aa7.52□□□□□ -1.21
TRIM28-210ENST00000597618 TMEM213A2RRL7 107 aa7.52□□□□□ -1.21
TRIM28-210ENST00000597618 A8MWP6 167 aa7.52□□□□□ -1.21
TRIM28-210ENST00000597618 DYNC1I1O14576 645 aa7.52□□□□□ -1.21
TRIM28-210ENST00000597618 EI24O14681 340 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 1015.8 ms