RNA–Protein interactions for RNA: ENST00000595700.5

SMG9-203, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-203ENST00000595700 FAM103A1Q9BTL3 118 aaKnown RBP11.51□□□□□ -0.57
SMG9-203ENST00000595700 GNB4Q9HAV0 340 aa11.51□□□□□ -0.57
SMG9-203ENST00000595700 SDHAF2Q9NX18 166 aa11.51□□□□□ -0.57
SMG9-203ENST00000595700 WI2-2373I1.2A0A1W2PRP0 233 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 CA2P00918 260 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 RPS16P62249 146 aaKnown RBP11.5□□□□□ -0.57
SMG9-203ENST00000595700 KCTD21Q4G0X4 260 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 C19orf54Q5BKX5 351 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 ZNF660Q6AZW8 331 aaPredicted RBP11.5□□□□□ -0.57
SMG9-203ENST00000595700 ZNF491Q8N8L2 437 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 MINDY2Q8NBR6 621 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 CASTOR1Q8WTX7 329 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 NUDCD2Q8WVJ2 157 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 OR5B12Q96R08 314 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 RNF5Q99942 180 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 SLC35D1Q9NTN3 355 aa11.5□□□□□ -0.57
SMG9-203ENST00000595700 RBM7Q9Y580 266 aaKnown RBP11.5□□□□□ -0.57
SMG9-203ENST00000595700 SOX15O60248 233 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 SPDEFO95238 335 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 DIRAS3O95661 229 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 CD36P16671 472 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 RAB9AP51151 201 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 LUMP51884 338 aaPredicted RBP11.49□□□□□ -0.57
SMG9-203ENST00000595700 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
SMG9-203ENST00000595700 FHL3Q13643 280 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 KIAA0141Q14154 515 aaPredicted RBP11.49□□□□□ -0.57
SMG9-203ENST00000595700 ARL6IP1Q15041 203 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 OR11H1Q8NG94 326 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 OR5M8Q8NGP6 311 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 FLYWCH2Q96CP2 140 aaKnown RBP11.49□□□□□ -0.57
SMG9-203ENST00000595700 UBE2E2Q96LR5 201 aa11.49□□□□□ -0.57
SMG9-203ENST00000595700 TSNAXQ99598 290 aaKnown RBP11.49□□□□□ -0.57
SMG9-203ENST00000595700 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMG9-203ENST00000595700 TMEM235A6NFC5 223 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 I3L521 148 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 SLC25A17O43808 307 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 EGR2P11161 476 aaPredicted RBP11.48□□□□□ -0.57
SMG9-203ENST00000595700 DTYMKP23919 212 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 GNB1P62873 340 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 SRSF7Q16629 238 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMG9-203ENST00000595700 HACD4Q5VWC8 232 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 Q6ZS49 121 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 PPP1R27Q86WC6 154 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 H1FOOQ8IZA3 346 aaPredicted RBP11.48□□□□□ -0.57
SMG9-203ENST00000595700 OR5H6Q8NGV6 325 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 CENPOQ9BU64 300 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 ST6GALNAC5Q9BVH7 336 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 RHBDL2Q9NX52 303 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
SMG9-203ENST00000595700 VSIG4Q9Y279 399 aa11.48□□□□□ -0.57
SMG9-203ENST00000595700 J3QRK9 145 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 IGLV2-23P01705 113 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 GNG2P59768 71 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 ZNF260Q3ZCT1 412 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 IDNKQ5T6J7 187 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 ASPHD1Q5U4P2 390 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 UNQ5815/PRO19632Q6UWF5 114 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 BVESQ8NE79 360 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 LFNGQ8NES3 379 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 ARPC1AQ92747 370 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 HARBI1Q96MB7 349 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 ALX4Q9H161 411 aaPredicted RBP11.47□□□□□ -0.57
SMG9-203ENST00000595700 NUBP2Q9Y5Y2 271 aa11.47□□□□□ -0.57
SMG9-203ENST00000595700 SEC14L6B5MCN3 397 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 ARPC1BO15143 372 aaKnown RBP11.46□□□□□ -0.57
SMG9-203ENST00000595700 SSX5O60225 188 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 SCGNO76038 276 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 TMEM267Q0VDI3 215 aaPredicted RBP11.46□□□□□ -0.57
SMG9-203ENST00000595700 ACTBL2Q562R1 376 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 DEFB121Q5J5C9 76 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 ZNF562Q6V9R5 426 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 TCTEX1D1Q8N7M0 179 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 OR1N2Q8NGR9 330 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 GRPEL2Q8TAA5 225 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 SLC25A38Q96DW6 304 aa11.46□□□□□ -0.57
SMG9-203ENST00000595700 NFYAP23511 347 aaPredicted RBP11.45□□□□□ -0.58
SMG9-203ENST00000595700 TGFBR1P36897 503 aa11.45□□□□□ -0.58
SMG9-203ENST00000595700 RUNX1Q01196 453 aa11.45□□□□□ -0.58
SMG9-203ENST00000595700 ZNF616Q08AN1 781 aa11.45□□□□□ -0.58
SMG9-203ENST00000595700 CBX3Q13185 183 aa11.45□□□□□ -0.58
SMG9-203ENST00000595700 FXYD3Q14802 87 aa11.45□□□□□ -0.58
SMG9-203ENST00000595700 C9orf66Q5T8R8 295 aa11.45□□□□□ -0.58
SMG9-203ENST00000595700 MS4A10Q96PG2 267 aa11.45□□□□□ -0.58
SMG9-203ENST00000595700 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
SMG9-203ENST00000595700 LINC00473A8K010 186 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 SHOXO15266 292 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 OR8U8P0C7N1 319 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 DUTP33316 252 aaKnown RBP11.44□□□□□ -0.58
SMG9-203ENST00000595700 SSBP2P81877 361 aaPredicted RBP11.44□□□□□ -0.58
SMG9-203ENST00000595700 DGCR2P98153 550 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 PITPNAQ00169 270 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 PJVKQ0ZLH3 352 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 RTL8BQ17RB0 113 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 TMEM177Q53S58 311 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 DDB2Q92466 427 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 DCSTAMPQ9H295 470 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 ETV7Q9Y603 341 aa11.44□□□□□ -0.58
SMG9-203ENST00000595700 TRAV18A0A075B6X5 111 aa11.43□□□□□ -0.58
SMG9-203ENST00000595700 CNIH1O95406 144 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms