RNA–Protein interactions for RNA: ENST00000593112.1

BECN1-219, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-219ENST00000593112 SRSF7Q16629 238 aaKnown RBP eCLIP13.63□□□□□ -0.23
BECN1-219ENST00000593112 ECSCRQ19T08 205 aa13.63□□□□□ -0.23
BECN1-219ENST00000593112 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.63□□□□□ -0.23
BECN1-219ENST00000593112 CASTOR1Q8WTX7 329 aa13.63□□□□□ -0.23
BECN1-219ENST00000593112 NUDCD2Q8WVJ2 157 aa13.63□□□□□ -0.23
BECN1-219ENST00000593112 C4orf3Q8WVX3 66 aa13.63□□□□□ -0.23
BECN1-219ENST00000593112 SLC25A38Q96DW6 304 aa13.63□□□□□ -0.23
BECN1-219ENST00000593112 METTL1Q9UBP6 276 aaKnown RBP13.63□□□□□ -0.23
BECN1-219ENST00000593112 TMEM235A6NFC5 223 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 SSX5O60225 188 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 DIRAS3O95661 229 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 IGLV2-23P01705 113 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 DTYMKP23919 212 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 TALDO1P37837 337 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 RAB25P57735 213 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 SSBP2P81877 361 aaPredicted RBP13.62□□□□□ -0.23
BECN1-219ENST00000593112 FHL3Q13643 280 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 PLGLAQ15195 96 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 ZNF260Q3ZCT1 412 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 ASPHD1Q5U4P2 390 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 HACD4Q5VWC8 232 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 ZNF660Q6AZW8 331 aaPredicted RBP13.62□□□□□ -0.23
BECN1-219ENST00000593112 PDPNQ86YL7 162 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 H1FOOQ8IZA3 346 aaPredicted RBP13.62□□□□□ -0.23
BECN1-219ENST00000593112 ZNF491Q8N8L2 437 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 RNF5Q99942 180 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 FAM103A1Q9BTL3 118 aaKnown RBP13.62□□□□□ -0.23
BECN1-219ENST00000593112 SLC35D1Q9NTN3 355 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 RHBDL2Q9NX52 303 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 NUBP2Q9Y5Y2 271 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 A3GALT2U3KPV4 340 aa13.62□□□□□ -0.23
BECN1-219ENST00000593112 A0A1W2PN81 502 aa13.61□□□□□ -0.23
BECN1-219ENST00000593112 I3L521 148 aa13.61□□□□□ -0.23
BECN1-219ENST00000593112 SLC25A17O43808 307 aa13.61□□□□□ -0.23
BECN1-219ENST00000593112 CA2P00918 260 aa13.61□□□□□ -0.23
BECN1-219ENST00000593112 CHRNA7P36544 502 aa13.61□□□□□ -0.23
BECN1-219ENST00000593112 RPS16P62249 146 aaKnown RBP13.61□□□□□ -0.23
BECN1-219ENST00000593112 OR5B12Q96R08 314 aa13.61□□□□□ -0.23
BECN1-219ENST00000593112 ST6GALNAC5Q9BVH7 336 aa13.61□□□□□ -0.23
BECN1-219ENST00000593112 COL7A1Q02388 2944 aa13.6□□□□□ -0.23
BECN1-219ENST00000593112 ARPC1BO15143 372 aaKnown RBP13.6□□□□□ -0.23
BECN1-219ENST00000593112 APOA2P02652 100 aa13.6□□□□□ -0.23
BECN1-219ENST00000593112 RAB9AP51151 201 aa13.6□□□□□ -0.23
BECN1-219ENST00000593112 GNB1P62873 340 aa13.6□□□□□ -0.23
BECN1-219ENST00000593112 PJVKQ0ZLH3 352 aa13.6□□□□□ -0.23
BECN1-219ENST00000593112 UBE2E2Q96LR5 201 aa13.6□□□□□ -0.23
BECN1-219ENST00000593112 GINS4Q9BRT9 223 aa13.6□□□□□ -0.23
BECN1-219ENST00000593112 ALX4Q9H161 411 aaPredicted RBP13.6□□□□□ -0.23
BECN1-219ENST00000593112 DNAH9Q9NYC9 4486 aa13.6□□□□□ -0.23
BECN1-219ENST00000593112 LINC00473A8K010 186 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 J3QRK9 145 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 SPDEFO95238 335 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 CRYGBP07316 175 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 LUMP51884 338 aaPredicted RBP13.59□□□□□ -0.23
BECN1-219ENST00000593112 ARL6IP1Q15041 203 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 MRGPRG-AS1Q2M3A8 158 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 IDNKQ5T6J7 187 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 TMEM65Q6PI78 240 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 ZNF562Q6V9R5 426 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 PPP1R27Q86WC6 154 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 BVESQ8NE79 360 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 OR11H1Q8NG94 326 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 DDB2Q92466 427 aa13.59□□□□□ -0.23
BECN1-219ENST00000593112 FLYWCH2Q96CP2 140 aaKnown RBP13.59□□□□□ -0.23
BECN1-219ENST00000593112 TSNAXQ99598 290 aaKnown RBP13.59□□□□□ -0.23
BECN1-219ENST00000593112 FOXA2Q9Y261 457 aaPredicted RBP13.59□□□□□ -0.23
BECN1-219ENST00000593112 SRRM4A7MD48 611 aaKnown RBP13.58□□□□□ -0.24
BECN1-219ENST00000593112 NFYAP23511 347 aaPredicted RBP13.58□□□□□ -0.24
BECN1-219ENST00000593112 RUNX1Q01196 453 aa13.58□□□□□ -0.24
BECN1-219ENST00000593112 LFNGQ8NES3 379 aa13.58□□□□□ -0.24
BECN1-219ENST00000593112 ABHD5Q8WTS1 349 aa13.58□□□□□ -0.24
BECN1-219ENST00000593112 YIPF6Q96EC8 236 aa13.58□□□□□ -0.24
BECN1-219ENST00000593112 MCRIP2Q9BUT9 160 aaKnown RBP13.58□□□□□ -0.24
BECN1-219ENST00000593112 VSIG4Q9Y279 399 aa13.58□□□□□ -0.24
BECN1-219ENST00000593112 RBM7Q9Y580 266 aaKnown RBP13.58□□□□□ -0.24
BECN1-219ENST00000593112 SORL1Q92673 2214 aa13.58□□□□□ -0.24
BECN1-219ENST00000593112 IGKV1D-13A0A0B4J2D9 117 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 IGKV1-13P0DP09 117 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 PTHLHP12272 177 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 DUTP33316 252 aaKnown RBP13.57□□□□□ -0.24
BECN1-219ENST00000593112 GNG2P59768 71 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 TMEM177Q53S58 311 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 UNQ5815/PRO19632Q6UWF5 114 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 OR5M8Q8NGP6 311 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 HARBI1Q96MB7 349 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 GPR61Q9BZJ8 451 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 DCSTAMPQ9H295 470 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 ETV7Q9Y603 341 aa13.57□□□□□ -0.24
BECN1-219ENST00000593112 TRAV18A0A075B6X5 111 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 SCGNO76038 276 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 IGLV2-14P01704 120 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 SCAND1P57086 179 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 FXYD3Q14802 87 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 AKIRIN2Q53H80 203 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 ACTBL2Q562R1 376 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 GVQW1Q8N7I0 195 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 TCTEX1D1Q8N7M0 179 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 TSPAN14Q8NG11 270 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 OR1N2Q8NGR9 330 aa13.56□□□□□ -0.24
BECN1-219ENST00000593112 GRPEL2Q8TAA5 225 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms