RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 FAM216AQ8WUB2 273 aa16.35■□□□□ 0.21
MBD3-209ENST00000592012 HIPK2Q9H2X6 1198 aa16.35■□□□□ 0.21
MBD3-209ENST00000592012 THBDP07204 575 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 TNFSF4P23510 183 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 NHLH1Q02575 133 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 PRR30Q53SZ7 412 aaPredicted RBP16.34■□□□□ 0.21
MBD3-209ENST00000592012 STUMQ69YW2 141 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 DUX4L9Q6RFH8 374 aaPredicted RBP16.34■□□□□ 0.21
MBD3-209ENST00000592012 H2BFWTQ7Z2G1 175 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 Q8TCH9 128 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 DPPA3Q6W0C5 159 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 SCGB1C1Q8TD33 95 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 CD300LFQ8TDQ1 290 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 RARRES2Q99969 163 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 RSG1Q9BU20 258 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 CALYQ9NYX4 217 aa16.34■□□□□ 0.21
MBD3-209ENST00000592012 BTBD17A6NE02 478 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 MARCH11A6NNE9 402 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 C17orf58Q2M2W7 97 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 LRRC75BQ2VPJ9 315 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 SLC35B3Q9H1N7 401 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 HCFC1P51610 2035 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 PPIHO43447 177 aaKnown RBP16.33■□□□□ 0.2
MBD3-209ENST00000592012 IGHV3-7P01780 117 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 TGIF2LYQ8IUE0 185 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 DEFB108BQ8NET1 73 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 SMDT1Q9H4I9 107 aa16.33■□□□□ 0.2
MBD3-209ENST00000592012 TLE4Q04727 773 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 BSPH1Q075Z2 132 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 ADIPOQQ15848 244 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 UTF1Q5T230 341 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 LILRB2Q8N423 598 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 SFT2D1Q8WV19 159 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 OR4C12Q96R67 309 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 IFI27L2Q9H2X8 130 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 CLN8Q9UBY8 286 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 TANC2Q9HCD6 1990 aa16.32■□□□□ 0.2
MBD3-209ENST00000592012 OR8U8P0C7N1 319 aa16.31■□□□□ 0.2
MBD3-209ENST00000592012 GAFA1Q96PS6 74 aa16.31■□□□□ 0.2
MBD3-209ENST00000592012 KIAA1456Q9P272 454 aa16.31■□□□□ 0.2
MBD3-209ENST00000592012 RBFOX3A6NFN3 312 aa16.31■□□□□ 0.2
MBD3-209ENST00000592012 OR4A8P0C604 315 aa16.31■□□□□ 0.2
MBD3-209ENST00000592012 RPL39P5Q59GN2 51 aa16.31■□□□□ 0.2
MBD3-209ENST00000592012 PSMG3Q9BT73 122 aaPredicted RBP16.31■□□□□ 0.2
MBD3-209ENST00000592012 PARD6GQ9BYG4 376 aaPredicted RBP16.31■□□□□ 0.2
MBD3-209ENST00000592012 DCAF16Q9NXF7 216 aa16.31■□□□□ 0.2
MBD3-209ENST00000592012 RAI1Q7Z5J4 1906 aaPredicted RBP16.31■□□□□ 0.2
MBD3-209ENST00000592012 KBTBD11-OT1A0A1B0GTJ5 212 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 ZG16O60844 167 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 FCGR3BO75015 233 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 CCL8P80075 99 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 SLC38A11Q08AI6 406 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 OR8G2PQ6IF36 304 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 ZNF788Q6ZQV5 615 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 ZDHHC16Q969W1 377 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 R3HDM4Q96D70 268 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 CCL13Q99616 98 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 WDR61Q9GZS3 305 aaKnown RBP16.3■□□□□ 0.2
MBD3-209ENST00000592012 RPRMQ9NS64 109 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 POLEQ07864 2286 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 KALRNO60229 2985 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 M0R1X1 148 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 SLC31A2O15432 143 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 SMUG1Q53HV7 270 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 DTD1Q8TEA8 209 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 ZNF665Q9H7R5 613 aa16.3■□□□□ 0.2
MBD3-209ENST00000592012 ITGB1BP1O14713 200 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 HPRT1P00492 218 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 GYPAP02724 150 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 HFEQ30201 348 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 TEX36Q5VZQ5 186 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 ETV3LQ6ZN32 361 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 C1orf229Q6ZS94 237 aaPredicted RBP16.29■□□□□ 0.2
MBD3-209ENST00000592012 FAM234AQ9H0X4 552 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 GFOD1Q9NXC2 390 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 PMS2P5A8MQ11 134 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 C17orf100A8MU93 164 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 RBMXL2O75526 392 aaKnown RBP16.29■□□□□ 0.2
MBD3-209ENST00000592012 CD55P08174 381 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 FAM87AP0C7U9 286 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 IRF2P14316 349 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 TCF23Q7RTU1 214 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 ZCCHC24Q8N2G6 241 aaKnown RBP16.29■□□□□ 0.2
MBD3-209ENST00000592012 LEAP2Q969E1 77 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 VSIRQ9H7M9 311 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 RAB9BQ9NP90 201 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 NDRG3Q9UGV2 375 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 GAB2Q9UQC2 676 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 PKDREJQ9NTG1 2253 aa16.29■□□□□ 0.2
MBD3-209ENST00000592012 TRGV10A0A0A0MS01 117 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 TRAV1-1A0A0B4J248 108 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 OR9G9P0C7N8 305 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 OR13C7P0DN81 318 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 SERF2P84101 59 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 CT45A1Q5HYN5 189 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 SSX8Q7RTT4 187 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 FAM216BQ8N7L0 139 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 CT45A3Q8NHU0 189 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 CIB3Q96Q77 187 aaPredicted RBP16.28■□□□□ 0.2
MBD3-209ENST00000592012 MSRB2Q9Y3D2 182 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms