RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 Q6ZT83 130 aa11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 WDR81Q562E7 1941 aa11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 PMCHL1Q16048 86 aa11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 TIMM23BQ5SRD1 257 aa11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 ZPLD1Q8TCW7 415 aa11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 VN1R17PQ8TDU5 208 aa11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 POM121Q96HA1 1249 aa11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 HYPMO75409 117 aa11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 HLA-DQA1P01909 254 aa11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 NAT2P11245 290 aa11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 RGP1Q92546 391 aaPredicted RBP11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 NPDC1Q9NQX5 325 aaPredicted RBP11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 HSF4Q9ULV5 492 aa11.46□□□□□ -0.58
SMARCA4-216ENST00000591545 CLDN14O95500 239 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 APOBEC3AP31941 199 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 MEF2BQ02080 365 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 AQP3Q92482 292 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 PAM16Q9Y3D7 125 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 OR5AC2Q9NZP5 309 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 HOXA4Q00056 320 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 PUSL1Q8N0Z8 303 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 PXMP4Q9Y6I8 212 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 C4orf51C9J302 202 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 GUCA2BQ16661 112 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 CALHM1Q8IU99 346 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 LINC00518Q8N0U6 118 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 TP53RKQ96S44 253 aa11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 DICER1Q9UPY3 1922 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-216ENST00000591545 ERVH48-1M5A8F1 160 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 IZUMO4Q1ZYL8 232 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 LRRC75BQ2VPJ9 315 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 SLC35E4Q6ICL7 350 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 UNQ9370/PRO34162Q6UXP9 181 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 PQLC2Q6ZP29 291 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 APCDD1LQ8NCL9 501 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 MEGF10Q96KG7 1140 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 HDHD3Q9BSH5 251 aaPredicted RBP11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 PDCD11Q14690 1871 aaKnown RBP11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 TMEM238LA0A1B0GVL6 79 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 A6NJY4 79 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 C9orf172C9J069 976 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 RHBDL1O75783 438 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 SRXN1Q9BYN0 137 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 MC5RP33032 325 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 SAXO1Q8IYX7 474 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 CEP250Q9BV73 2442 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 SMAD7O15105 426 aaKnown RBP11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 ID1P41134 155 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 MFAP2P55001 183 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 MRPL14Q6P1L8 145 aaKnown RBP11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 ZNF738Q8NE65 137 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 SLC25A38Q96DW6 304 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 PKIBQ9C010 78 aa11.44□□□□□ -0.58
SMARCA4-216ENST00000591545 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 IGHV1-69-2A0A0G2JMI3 117 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 CD40P25942 277 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 MPV17P39210 176 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 OR8A1Q8NGG7 326 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 RBM14Q96PK6 669 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 MYOFQ9NZM1 2061 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 IGLV1-36A0A0B4J1U3 117 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 J3QW42 95 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 HKR1P10072 659 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 PPP1CCP36873 323 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 P2RY4P51582 365 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 ZFP36L1Q07352 338 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 ZNF645Q8N7E2 425 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 HILPDAQ9Y5L2 63 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 LRRC37A2A6NM11 1700 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 ZNF735P0CB33 412 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 ZNF236Q9UL36 1845 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 TMEM30BQ3MIR4 351 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 C12orf54Q6X4T0 127 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 OR1P1Q8NH06 330 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 FAM222BQ8WU58 562 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 IMMP1LQ96LU5 166 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 ZNF488Q96MN9 340 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 LINC00470Q9BZP3 86 aa11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 AKIRIN1Q9H9L7 192 aaPredicted RBP11.43□□□□□ -0.58
SMARCA4-216ENST00000591545 LOC105371242A0A075B767 164 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 COMPP49747 757 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 FAM209BQ5JX69 171 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 KLF14Q8TD94 323 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 CHCHD2Q9Y6H1 151 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 NINQ8N4C6 2090 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 RPS11P62280 158 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 PPIAL4CA0A0B4J2A2 164 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 PPIAL4GP0DN37 164 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 KIR2DL2P43627 348 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 RUNX1Q01196 453 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 TAF15Q92804 592 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 OR51M1Q9H341 326 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 TRAV39A0A0B4J263 110 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 MPTX1A8MV57 137 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 RPL27AP46776 148 aaKnown RBP11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 REG1BP48304 166 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 UNQ6494/PRO21346Q6UXR6 183 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 NEU4Q8WWR8 484 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 TMEM45BQ96B21 275 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms