RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ZNF833PQ6ZTB9 187 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 OR1N2Q8NGR9 330 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 GALMQ96C23 342 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 ZNF251Q9BRH9 671 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 ABHD14AQ9BUJ0 271 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 MRPS26Q9BYN8 205 aaKnown RBP8.08□□□□□ -1.12
VPS4B-207ENST00000591519 ABRACLQ9P1F3 81 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 ELF5Q9UKW6 265 aaPredicted RBP8.08□□□□□ -1.12
VPS4B-207ENST00000591519 HSF4Q9ULV5 492 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 VSIG4Q9Y279 399 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 G3V318 75 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 ATP6V0E1O15342 81 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 NBR2O15453 112 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 NAPSAO96009 420 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 RPS19P39019 145 aaKnown RBP8.07□□□□□ -1.12
VPS4B-207ENST00000591519 HLA-DRB3P79483 266 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 ZNF616Q08AN1 781 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 HMGN3Q15651 99 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 C5orf64Q2M2E5 130 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 ZNF260Q3ZCT1 412 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 C19orf54Q5BKX5 351 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 GPR107Q5VW38 600 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 ZNF660Q6AZW8 331 aaPredicted RBP8.07□□□□□ -1.12
VPS4B-207ENST00000591519 ZNF429Q86V71 674 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 OR13F1Q8NGS4 319 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 PRR25Q96S07 402 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 MRPL20Q9BYC9 149 aaKnown RBP8.07□□□□□ -1.12
VPS4B-207ENST00000591519 GHITMQ9H3K2 345 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 GNB4Q9HAV0 340 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 C12orf4Q9NQ89 552 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 ZNF230Q9UIE0 474 aaPredicted RBP8.07□□□□□ -1.12
VPS4B-207ENST00000591519 ZNF256Q9Y2P7 627 aaPredicted RBP8.07□□□□□ -1.12
VPS4B-207ENST00000591519 KCNK7Q9Y2U2 307 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 WSB1Q9Y6I7 421 aa8.07□□□□□ -1.12
VPS4B-207ENST00000591519 TRAV41A0A0B4J266 112 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 RAB27BO00194 218 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 MFNGO00587 321 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 ITGB1BP1O14713 200 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 RAB29O14966 203 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 SCTP09683 121 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 HIST1H1DP16402 221 aaKnown RBP8.06□□□□□ -1.12
VPS4B-207ENST00000591519 CNTFRP26992 372 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 OR3A3P47888 321 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 CDNFQ49AH0 187 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 ZNF880Q6PDB4 577 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 MOB1BQ7L9L4 216 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 GPR141Q7Z602 305 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 RNF5Q99942 180 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 PARP12Q9H0J9 701 aaKnown RBP8.06□□□□□ -1.12
VPS4B-207ENST00000591519 IFI27L2Q9H2X8 130 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 RIMS4Q9H426 269 aaPredicted RBP8.06□□□□□ -1.12
VPS4B-207ENST00000591519 Q9N2K0 584 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 RHBDL2Q9NX52 303 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 PIPOXQ9P0Z9 390 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 OR1A1Q9P1Q5 309 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 SLC23A1Q9UHI7 598 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 NUBP2Q9Y5Y2 271 aa8.06□□□□□ -1.12
VPS4B-207ENST00000591519 TRAV18A0A075B6X5 111 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 SAA2-SAA4A0A096LPE2 208 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 TRBV6-6A0A0A6YYG2 114 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 TMEM235A6NFC5 223 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 BET1O15155 118 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 HSPA12AO43301 675 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 FCER2P06734 321 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 FCGR3AP08637 254 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 SAA2P0DJI9 122 aaPredicted RBP8.05□□□□□ -1.12
VPS4B-207ENST00000591519 CT45A6P0DMU7 189 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 CT45A5P0DMU8 189 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 CT45A7P0DMV0 189 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 EGR2P11161 476 aaPredicted RBP8.05□□□□□ -1.12
VPS4B-207ENST00000591519 MC5RP33032 325 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 TALDO1P37837 337 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 GNB1P62873 340 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 TCTEX1D1Q8N7M0 179 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 OR2AK2Q8NG84 335 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 OR5AN1Q8NGI8 311 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 NUDCD2Q8WVJ2 157 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 DCUN1D4Q92564 292 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 PTX4Q96A99 478 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 SLC25A38Q96DW6 304 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 AGMATQ9BSE5 352 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 KIAA1456Q9P272 454 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 SMAD5-AS1Q9Y6J3 95 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 RYR3Q15413 4870 aa8.05□□□□□ -1.12
VPS4B-207ENST00000591519 TRDCB7Z8K6 153 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 C3orf84H3BNL1 204 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 RRHO14718 337 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 OVOL1O14753 267 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 SOX15O60248 233 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 GSTT2P0CG29 244 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 GSTT2BP0CG30 244 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 PTHLHP12272 177 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 CEACAM6P40199 344 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 GNG2P59768 71 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 CX3CL1P78423 397 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 TMEM267Q0VDI3 215 aaPredicted RBP8.04□□□□□ -1.12
VPS4B-207ENST00000591519 AKIRIN2Q53H80 203 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 IGSF11Q5DX21 431 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 ABHD14BQ96IU4 210 aa8.04□□□□□ -1.12
VPS4B-207ENST00000591519 ST6GALNAC5Q9BVH7 336 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms