RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 TBC1D26Q86UD7 250 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 SLC51BQ86UW2 128 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 OR10S1Q8NGN2 331 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 CLDND2Q8NHS1 167 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 TOLLIPQ9H0E2 274 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 CEP350Q5VT06 3117 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 FAM181BA6NEQ2 426 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 FGF16O43320 207 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 NDUFB6O95139 128 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 H2AFB1P0C5Y9 115 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 OR9G9P0C7N8 305 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 LEPP41159 167 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 TPTE2P1Q5T6R2 138 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 WDR82Q6UXN9 313 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 UBE2DNLQ8IWF7 75 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 STHQ8IWL8 128 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 OR52B4Q8NGK2 314 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 CACNG8Q8WXS5 425 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 GGACTQ9BVM4 153 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 TRBV7-1A0A0A6YYK4 115 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 C17orf51A8MQB3 221 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 FAM157CP0CG43 387 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 VSIG8P0DPA2 414 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 TDGF1P3P51864 188 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 GUK1Q16774 197 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 TMEM41BQ5BJD5 291 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 NRARPQ7Z6K4 114 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 LRRC75AQ8NAA5 344 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 MRPL30Q8TCC3 161 aaKnown RBP5.28□□□□□ -1.56
SMAD4-212ENST00000591126 MBD6Q96DN6 1003 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 ADAT3Q96EY9 351 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-212ENST00000591126 Q96M66 194 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 LINC00052Q96N35 136 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 HSPB11Q9Y547 144 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 A0A1B0GTI1 187 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 SERTM2A0A1B0GWG4 89 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 SNURFLB1AK76 121 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 CHEK1O14757 476 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 IGLV1-44P01699 117 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 SLC25A5P05141 298 aaKnown RBP5.28□□□□□ -1.56
SMAD4-212ENST00000591126 OR4E1P0C645 316 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 WT1P19544 449 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-212ENST00000591126 RPL12P30050 165 aaKnown RBP5.28□□□□□ -1.56
SMAD4-212ENST00000591126 ASAH1Q13510 395 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 TMEM249Q2WGJ8 235 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 SNAI3Q3KNW1 292 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 C9orf66Q5T8R8 295 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 PRSS54Q6PEW0 395 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 CCDC190Q86UF4 302 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 RELL2Q8NC24 303 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-212ENST00000591126 OR4P4Q8NGL7 312 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 OR1B1Q8NGR6 318 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 TM2D1Q9BX74 207 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 C21orf62Q9NYP8 219 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 FBXL7Q9UJT9 491 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 FAM215AQ9Y5M1 114 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 PXMP4Q9Y6I8 212 aa5.28□□□□□ -1.56
SMAD4-212ENST00000591126 RP1L1Q8IWN7 2480 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-212ENST00000591126 H7C1H1 209 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 GCM2O75603 506 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-212ENST00000591126 P2RY1P47900 373 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 UBE2KP61086 200 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ACOT7LQ6ZUV0 252 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF525Q8N782 197 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ZFAND2BQ8WV99 257 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 KAAG1Q9UBP8 84 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 TSSC4Q9Y5U2 329 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-212ENST00000591126 TDRD6O60522 2096 aaKnown RBP5.27□□□□□ -1.57
SMAD4-212ENST00000591126 PSPNO60542 156 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 C1QL1O75973 258 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 CD3DP04234 171 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 UQCRFS1P47985 274 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 SLC50A1Q9BRV3 221 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 MRPL32Q9BYC8 188 aaKnown RBP5.27□□□□□ -1.57
SMAD4-212ENST00000591126 TLNRD1Q9H1K6 362 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 RPRMQ9NS64 109 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 MTCH1Q9NZJ7 389 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 AHCTF1Q8WYP5 2266 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 CENPVL1A0A0U1RR11 272 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ARPC5O15511 151 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 MGST1P10620 155 aaKnown RBP5.27□□□□□ -1.57
SMAD4-212ENST00000591126 IAPPP10997 89 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 LMO1P25800 156 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 RPS19P39019 145 aaKnown RBP5.27□□□□□ -1.57
SMAD4-212ENST00000591126 INSL3P51460 131 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 RAB5BP61020 215 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 CLINT1Q14677 625 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 PIGYQ3MUY2 71 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 SPATA31B1PQ5VZV4 182 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF600Q6ZNG1 722 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 NCCRP1Q6ZVX7 275 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-212ENST00000591126 FAM216BQ8N7L0 139 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF738Q8NE65 137 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 OR13C5Q8NGS8 318 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 TRBV5-7A0A0A0MS05 114 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF705EA8MWA4 302 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-212ENST00000591126 SAP30O75446 220 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 C1QCP02747 245 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 PRB1P04280 392 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF735P0CB33 412 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms