RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 DEFB112Q30KQ8 113 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 TPTE2P1Q5T6R2 138 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 LIN54Q6MZP7 749 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 FAM71F2Q6NXP2 309 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 ODF3L1Q8IXM7 274 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 LYG1Q8N1E2 194 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 DRAXINQ8NBI3 349 aaPredicted RBP13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 TOMM40LQ969M1 308 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 RPEQ96AT9 228 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 CHIAQ9BZP6 476 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 PRR13Q9NZ81 148 aa13.8□□□□□ -0.2
RPRD1A-209ENST00000590898 C9orf170A2RU37 121 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 ST8SIA5O15466 376 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 SLC22A5O76082 557 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 OR8U9P0C7N5 309 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 ANXA3P12429 323 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 PGAM2P15259 253 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 LUMP51884 338 aaPredicted RBP13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 ZNF816Q0VGE8 651 aaPredicted RBP13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 LYG2Q86SG7 212 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 OR8U1Q8NH10 309 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 CASTOR1Q8WTX7 329 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 C17orf50Q8WW18 174 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 ZNF436Q9C0F3 470 aaPredicted RBP13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 RBM7Q9Y580 266 aaKnown RBP13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 SOX21Q9Y651 276 aaPredicted RBP13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 CUBNO60494 3623 aa13.79□□□□□ -0.2
RPRD1A-209ENST00000590898 GOSR2O14653 212 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 TXNL1O43396 289 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 PPYP01298 95 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 GAPDHP04406 335 aaKnown RBP13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 AADACP22760 399 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 ARHGDIBP52566 201 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 H2BFSP57053 126 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 SUPT4H1P63272 117 aaKnown RBP13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 LDLRAD3Q86YD5 345 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 OR8H3Q8N146 312 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 ZNF48Q96MX3 618 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 S1PR3Q99500 378 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 HILPDAQ9Y5L2 63 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 DYNLT3P51808 116 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 Q5BKY6 102 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 RBMS3Q6XE24 437 aaKnown RBP13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 Q6YL49 198 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 ZNF833PQ6ZTB9 187 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 NOXA1Q86UR1 476 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 DYNAPQ8N1N2 210 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 C12orf45Q8N5I9 185 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 ZDHHC16Q969W1 377 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 ABHD14BQ96IU4 210 aa13.78□□□□□ -0.2
RPRD1A-209ENST00000590898 G3V3Q6 166 aa13.77□□□□□ -0.21
RPRD1A-209ENST00000590898 TMEM128Q5BJH2 165 aa13.77□□□□□ -0.21
RPRD1A-209ENST00000590898 ZNF418Q8TF45 676 aaPredicted RBP13.77□□□□□ -0.21
RPRD1A-209ENST00000590898 RTN4IP1Q8WWV3 396 aaPredicted RBP13.77□□□□□ -0.21
RPRD1A-209ENST00000590898 ZNF251Q9BRH9 671 aa13.77□□□□□ -0.21
RPRD1A-209ENST00000590898 RNF150Q9ULK6 438 aa13.77□□□□□ -0.21
RPRD1A-209ENST00000590898 JMJD1CQ15652 2540 aa13.77□□□□□ -0.21
RPRD1A-209ENST00000590898 SAA2-SAA4A0A096LPE2 208 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 CCSO14618 274 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 HSD17B6O14756 317 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 C1QBP02746 253 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 SAA2P0DJI9 122 aaPredicted RBP13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 GPR12P47775 334 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 DHODHQ02127 395 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 SLC9A3R2Q15599 337 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 MSMO1Q15800 293 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 TGIF2LXQ8IUE1 241 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 MOB3AQ96BX8 217 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 OR2D2Q9H210 308 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 BOLA1Q9Y3E2 137 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 TAS2R31P59538 309 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 HERV-K104P61576 105 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 DIAPH2-AS1Q14236 149 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 HABP2Q14520 560 aaPredicted RBP13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 SURF2Q15527 256 aaPredicted RBP13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 LURAP1LQ8IV03 231 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 ZNF645Q8N7E2 425 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 SIGLECL1Q8N7X8 197 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 OR11H4Q8NGC9 324 aa13.76□□□□□ -0.21
RPRD1A-209ENST00000590898 NF1P21359 2839 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 IGKV1D-13A0A0B4J2D9 117 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 IGHV1-3A0A0C4DH29 117 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 PROP1O75360 226 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 IGKV1-13P0DP09 117 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 BRS3P32247 399 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 IER3P46695 156 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 ZBTB34Q8NCN2 500 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 MITD1Q8WV92 249 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 SSMEM1Q8WWF3 244 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 SCGB3A2Q96PL1 93 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 SSX3Q99909 188 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 PLSCR3Q9NRY6 295 aa13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 C14orf166Q9Y224 244 aaKnown RBP13.75□□□□□ -0.21
RPRD1A-209ENST00000590898 A0A1W2PPI3 338 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 CTSDP07339 412 aaPredicted RBP13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 UCP3P55916 312 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 LRRC75BQ2VPJ9 315 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 PHLDA2Q53GA4 152 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 LPCAT3Q6P1A2 487 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms