RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ZNF705BP0CI00 300 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-208ENST00000589797 PRSS44E7EML9 344 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 EGR1P18146 543 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 ORM2P19652 201 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 CDC34P49427 236 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-208ENST00000589797 RTP5Q14D33 572 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 ACP7Q6ZNF0 438 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 OR13D1Q8NGV5 346 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 RBKSQ9H477 322 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 CALYQ9NYX4 217 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 CACFD1Q9UGQ2 172 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 MARCH11A6NNE9 402 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 KRTCAP3Q53RY4 240 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A10PA6NDY2 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A18PA6NE21 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A16PA6NEW6 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A20PA6NIJ5 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A8PA6NJQ4 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A7PA6NKC0 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A22PA8MWA6 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A12PA8MX19 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A5PA8MXJ8 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A23PA8MXZ1 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 RAMP3O60896 148 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 CD55P08174 381 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A15PP0C7V4 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A13PP0C7W8 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A14PP0C7W9 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM90A24PP0C7X0 464 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 S100A12P80511 92 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 TMEM41BQ5BJD5 291 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 FAM78BQ5VT40 261 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 LIME1Q9H400 295 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 TNCP24821 2201 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 ADH4P08319 380 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 LHFPL1Q86WI0 220 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 MRPL41Q8IXM3 137 aaKnown RBP12.3□□□□□ -0.44
RETREG3-208ENST00000589797 SAXO1Q8IYX7 474 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 TMEM147Q9BVK8 224 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 PARP11Q9NR21 331 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 KIAA1324LA8MWY0 1029 aaPredicted RBP12.3□□□□□ -0.44
RETREG3-208ENST00000589797 USP9YO00507 2555 aaPredicted RBP12.3□□□□□ -0.44
RETREG3-208ENST00000589797 PPP1R2P9O14990 202 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 HSPB1P04792 205 aaKnown RBP12.3□□□□□ -0.44
RETREG3-208ENST00000589797 NAT1P18440 290 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 TNXAQ16473 311 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 GALNT14Q96FL9 552 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 ABCA2Q9BZC7 2435 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 GAL3ST2Q9H3Q3 398 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 MS4A5Q9H3V2 200 aa12.3□□□□□ -0.44
RETREG3-208ENST00000589797 H3BQ15 152 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 FGF2P09038 288 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 RAB7AP51149 207 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 LINC00596Q86U02 117 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 LDLRAD3Q86YD5 345 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 BLNKQ8WV28 456 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 ATPIF1Q9UII2 106 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 J3QR06 171 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 PLAUP00749 431 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 MEGF10Q96KG7 1140 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 HILPDAQ9Y5L2 63 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 IGHV1-18A0A0C4DH31 117 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 CD40P25942 277 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 SUB1P53999 127 aaKnown RBP eCLIP12.29□□□□□ -0.44
RETREG3-208ENST00000589797 DLK1P80370 383 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 HCP5Q6MZN7 132 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 TGIF2LYQ8IUE0 185 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 TGIF2LXQ8IUE1 241 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 SAMD10Q9BYL1 202 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 TMPRSS5Q9H3S3 457 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 RPRMQ9NS64 109 aa12.29□□□□□ -0.44
RETREG3-208ENST00000589797 LYRM2Q9NU23 88 aaPredicted RBP12.29□□□□□ -0.44
RETREG3-208ENST00000589797 RBP4P02753 201 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 GLRXP35754 106 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 ZNF273Q14593 569 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 NCMAPQ5T1S8 102 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 KCNIP4Q6PIL6 250 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 WDR82Q6UXN9 313 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 SEC11CQ9BY50 192 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 GNB4Q9HAV0 340 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 ZNF320A2RRD8 509 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 MBP02144 154 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 CHRNB4P30926 498 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 BSPH1Q075Z2 132 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 NRN1LQ496H8 165 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 TIMM23BQ5SRD1 257 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 ZNF645Q8N7E2 425 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 OR10A7Q8NGE5 316 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 OR4P4Q8NGL7 312 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 STARD4Q96DR4 205 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 HES4Q9HCC6 221 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 ZNF835Q9Y2P0 537 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 MED12LQ86YW9 2145 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 PGA5P0DJD9 388 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 UCP3P55916 312 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 ERVFRD-1P60508 538 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 FLI1Q01543 452 aaPredicted RBP12.28□□□□□ -0.44
RETREG3-208ENST00000589797 ZNF90Q03938 601 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 DAZAP1Q96EP5 407 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms