RNA–Protein interactions for RNA: ENST00000589140.1

SEPT9-223, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-223	ENST00000589140	KMT2C	Q8NEZ4	4911 aa	Known RBP	15.22	■□□□□ 0.03
SEPT9-223	ENST00000589140	TRBV6-7	A0A0A0MS04	114 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	ERICH4	A6NGS2	130 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140		M0R1X1	148 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	BET1	O15155	118 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	MRPS14	O60783	128 aa	Known RBP	15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	DIRAS3	O95661	229 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	CA2	P00918	260 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	SNRPB	P14678	240 aa	Known RBP	15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	GNB3	P16520	340 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	GABARAPL2	P60520	117 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	RPS16	P62249	146 aa	Known RBP	15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	ACTBL2	Q562R1	376 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	IGSF11	Q5DX21	431 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	UNQ5815/PRO19632	Q6UWF5	114 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	CASTOR1	Q8WTX7	329 aa		15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	FLYWCH2	Q96CP2	140 aa	Known RBP	15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	FAM103A1	Q9BTL3	118 aa	Known RBP	15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	ALX4	Q9H161	411 aa	Predicted RBP	15.21	■□□□□ 0.03
SEPT9-223	ENST00000589140	OR8U9	P0C7N5	309 aa		15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	GSTT2	P0CG29	244 aa		15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	GSTT2B	P0CG30	244 aa		15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	HIST1H1D	P16402	221 aa	Known RBP	15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	C22orf42	Q6IC83	251 aa		15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	LFNG	Q8NES3	379 aa		15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	OR10J5	Q8NHC4	309 aa		15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	DCUN1D4	Q92564	292 aa		15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	TPSG1	Q9NRR2	321 aa		15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	SLC35D1	Q9NTN3	355 aa		15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	ZNF256	Q9Y2P7	627 aa	Predicted RBP	15.2	■□□□□ 0.02
SEPT9-223	ENST00000589140	TENM3	Q9P273	2699 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140		A0A075B6Q4	140 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140		A0A0B4J203	849 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	METTL21EP	A6NDL7	271 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	LINC01619	G3V211	115 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	OVOL1	O14753	267 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	SLC25A17	O43808	307 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	LGALS1	P09382	135 aa	Known RBP	15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	ARPC1A	Q92747	370 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	OR2D2	Q9H210	308 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	SDHAF2	Q9NX18	166 aa		15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	ZNF230	Q9UIE0	474 aa	Predicted RBP	15.19	■□□□□ 0.02
SEPT9-223	ENST00000589140	CD40LG	P29965	261 aa		15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140	ARFRP1	Q13795	201 aa		15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140	SRSF7	Q16629	238 aa	Known RBP eCLIP	15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140	UBE2U	Q5VVX9	321 aa		15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140		Q6ZS49	121 aa		15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140	ZNF429	Q86V71	674 aa		15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140	NR2C2AP	Q86WQ0	139 aa		15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140	MAFIP	Q8WZ33	124 aa		15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140	DLX4	Q92988	240 aa	Predicted RBP	15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140	SLA2	Q9H6Q3	261 aa		15.18	■□□□□ 0.02
SEPT9-223	ENST00000589140	IGHV4OR15-8	A0A075B7B6	117 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140		A0A087WW49	117 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	ARPC1B	O15143	372 aa	Known RBP	15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	NHLRC4	P0CG21	123 aa	Predicted RBP	15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	TALDO1	P37837	337 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	LGALS7	P47929	136 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	SLURP1	P55000	103 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	TPPP2	P59282	170 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	TAGLN	Q01995	201 aa	Known RBP	15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	FXYD3	Q14802	87 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	C5orf30	Q96GV9	206 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	MS4A10	Q96PG2	267 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	CENPO	Q9BU64	300 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	ATG5	Q9H1Y0	275 aa		15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	HUWE1	Q7Z6Z7	4374 aa	Known RBP	15.17	■□□□□ 0.02
SEPT9-223	ENST00000589140	TNC	P24821	2201 aa		15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	IGLV2-23	P01705	113 aa		15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	IGHV3-11	P01762	117 aa		15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	CRYGB	P07316	175 aa		15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	FGF9	P31371	208 aa	Predicted RBP	15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	SSBP2	P81877	361 aa	Predicted RBP	15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	ARL6IP1	Q15041	203 aa		15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	SPART	Q8N0X7	666 aa		15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	GRPEL2	Q8TAA5	225 aa		15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	RHOV	Q96L33	236 aa		15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	GINS4	Q9BRT9	223 aa		15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	TXNL4B	Q9NX01	149 aa	Known RBP	15.16	■□□□□ 0.02
SEPT9-223	ENST00000589140	SMIM30	A4D0T7	59 aa		15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	ATP6V1G2	O95670	118 aa		15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	HSPB1	P04792	205 aa	Known RBP	15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	DTYMK	P23919	212 aa		15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	PSMB9	P28065	219 aa		15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	TMEM177	Q53S58	311 aa		15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	BVES	Q8NE79	360 aa		15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	HARBI1	Q96MB7	349 aa		15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	WWC2-AS2	Q96NR7	200 aa		15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	RBM7	Q9Y580	266 aa	Known RBP	15.15	■□□□□ 0.02
SEPT9-223	ENST00000589140	IGKV1D-8	A0A087WSZ0	117 aa		15.14	■□□□□ 0.01
SEPT9-223	ENST00000589140	NOTO	A8MTQ0	251 aa		15.14	■□□□□ 0.01
SEPT9-223	ENST00000589140		H3BUA1	57 aa		15.14	■□□□□ 0.01
SEPT9-223	ENST00000589140	SAP30	O75446	220 aa		15.14	■□□□□ 0.01
SEPT9-223	ENST00000589140	CNIH1	O95406	144 aa		15.14	■□□□□ 0.01
SEPT9-223	ENST00000589140	LY86	O95711	162 aa		15.14	■□□□□ 0.01
SEPT9-223	ENST00000589140	TRGV3	P03979	118 aa		15.14	■□□□□ 0.01
SEPT9-223	ENST00000589140	RRAS	P10301	218 aa		15.14	■□□□□ 0.01
SEPT9-223	ENST00000589140	PJVK	Q0ZLH3	352 aa		15.14	■□□□□ 0.01
SEPT9-223	ENST00000589140	CBX3	Q13185	183 aa		15.14	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 91 ms