RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ZNF596Q8TC21 504 aa9.9□□□□□ -0.83
CCBE1-203ENST00000589116 LEAP2Q969E1 77 aa9.9□□□□□ -0.83
CCBE1-203ENST00000589116 RRNAD1Q96FB5 475 aaKnown RBP9.9□□□□□ -0.83
CCBE1-203ENST00000589116 ADTRPQ96IZ2 230 aa9.9□□□□□ -0.83
CCBE1-203ENST00000589116 CCL19Q99731 98 aa9.9□□□□□ -0.83
CCBE1-203ENST00000589116 ARL6Q9H0F7 186 aa9.9□□□□□ -0.83
CCBE1-203ENST00000589116 PRELID3BQ9Y3B1 194 aa9.9□□□□□ -0.83
CCBE1-203ENST00000589116 NAV3Q8IVL0 2385 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 USF3Q68DE3 2245 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 SAA2-SAA4A0A096LPE2 208 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 RNF222A6NCQ9 220 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 LINC00473A8K010 186 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 M0R1X1 148 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 ST8SIA3O43173 380 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 PROP1O75360 226 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 SCGB1D2O95969 90 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 MBPP02686 304 aaPredicted RBP9.89□□□□□ -0.83
CCBE1-203ENST00000589116 SAA2P0DJI9 122 aaPredicted RBP9.89□□□□□ -0.83
CCBE1-203ENST00000589116 IGHV1-8P0DP01 117 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 THBS3P49746 956 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 GNG10P50151 68 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 GNB2P62879 340 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 FAM71F2Q6NXP2 309 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 ODF3L1Q8IXM7 274 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 LYG1Q8N1E2 194 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 OR1S1Q8NH92 325 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 S1PR3Q99500 378 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 HEXA-AS1Q9H8Q6 139 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 OR5AC2Q9NZP5 309 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 PAIP2BQ9ULR5 123 aaKnown RBP9.89□□□□□ -0.83
CCBE1-203ENST00000589116 POMT1Q9Y6A1 747 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 SESN1Q9Y6P5 492 aa9.89□□□□□ -0.83
CCBE1-203ENST00000589116 PPIAL4CA0A0B4J2A2 164 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 hCG_1809904A0A1W2PP81 198 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 A0A1W2PPE2 198 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 A0A1W2PR64 198 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 A0A1W2PRV1 198 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 E5RGE8 158 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 K7EPK0 472 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 TSC22D2O75157 780 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 NDUFS7O75251 213 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 IGHV3-7P01780 117 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 LIPFP07098 398 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 PPIAL4GP0DN37 164 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 NKX2-1P43699 371 aaPredicted RBP9.88□□□□□ -0.83
CCBE1-203ENST00000589116 RPL39P5Q59GN2 51 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 UTF1Q5T230 341 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 ZNF767PQ75MW2 155 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 FAM71E2Q8N5Q1 922 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 LY6G5BQ8NDX9 201 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 TNFRSF14Q92956 283 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 GPR146Q96CH1 333 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 AQP10Q96PS8 301 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 ZNF251Q9BRH9 671 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 SSBP3Q9BWW4 388 aaPredicted RBP9.88□□□□□ -0.83
CCBE1-203ENST00000589116 PLEKHA2Q9HB19 425 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 COA4Q9NYJ1 87 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 NSG2Q9Y328 171 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 LSM5Q9Y4Y9 91 aaKnown RBP9.88□□□□□ -0.83
CCBE1-203ENST00000589116 MMP24Q9Y5R2 645 aa9.88□□□□□ -0.83
CCBE1-203ENST00000589116 A0A1W2PPE3 182 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 RAMP3O60896 148 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 PITX3O75364 302 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 HPRT1P00492 218 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 IGKV1-5P01602 117 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 BRWD1-AS2P59051 145 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 NCR3LG1Q68D85 454 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 C11orf42Q8N5U0 333 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 OR9G1Q8NH87 305 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 DDB2Q92466 427 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 MALRD1Q5VYJ5 2156 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 CSMD2Q7Z408 3487 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 A0A0G2JRQ6 117 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 KANTRA0A1W2PQU2 76 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 J3QR06 171 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 BCL2L11O43521 198 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 S1PR2O95136 353 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 IGHV4-39P01824 125 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 P0C879 139 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 MMP9P14780 707 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 PVALBP20472 110 aaPredicted RBP9.87□□□□□ -0.83
CCBE1-203ENST00000589116 PDLIM4P50479 330 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 AP2S1P53680 142 aaPredicted RBP9.87□□□□□ -0.83
CCBE1-203ENST00000589116 ID3Q02535 119 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 ZNF816Q0VGE8 651 aaPredicted RBP9.87□□□□□ -0.83
CCBE1-203ENST00000589116 OR2B11Q5JQS5 317 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 SPNS3Q6ZMD2 512 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 ZNF833PQ6ZTB9 187 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 FOXRED2Q8IWF2 684 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 OR4S2Q8NH73 311 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 TMEM133Q9H2Q1 129 aa9.87□□□□□ -0.83
CCBE1-203ENST00000589116 BARX1Q9HBU1 254 aaPredicted RBP9.87□□□□□ -0.83
CCBE1-203ENST00000589116 RCL1Q9Y2P8 373 aaKnown RBP9.87□□□□□ -0.83
CCBE1-203ENST00000589116 C22orf46C9J442 243 aa9.86□□□□□ -0.83
CCBE1-203ENST00000589116 FAM90A26D6RGX4 464 aa9.86□□□□□ -0.83
CCBE1-203ENST00000589116 FCGR3BO75015 233 aa9.86□□□□□ -0.83
CCBE1-203ENST00000589116 HOXB4P17483 251 aaPredicted RBP9.86□□□□□ -0.83
CCBE1-203ENST00000589116 EPHA1P21709 976 aa9.86□□□□□ -0.83
CCBE1-203ENST00000589116 IL3RAP26951 378 aa9.86□□□□□ -0.83
CCBE1-203ENST00000589116 ARHGDIBP52566 201 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms