RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 OR5M8Q8NGP6 311 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 FLYWCH2Q96CP2 140 aaKnown RBP11.27□□□□□ -0.6
DDX39A-208ENST00000588692 DUX3Q96PT4 197 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 DCSTAMPQ9H295 470 aa11.27□□□□□ -0.6
DDX39A-208ENST00000588692 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.6
DDX39A-208ENST00000588692 SNRPBP14678 240 aaKnown RBP11.26□□□□□ -0.61
DDX39A-208ENST00000588692 CD36P16671 472 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 RAB25P57735 213 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 RPS16P62249 146 aaKnown RBP11.26□□□□□ -0.61
DDX39A-208ENST00000588692 RUNX1Q01196 453 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 CBX3Q13185 183 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 ECSCRQ19T08 205 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 PYHIN1Q6K0P9 492 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 H1FOOQ8IZA3 346 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-208ENST00000588692 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 LGALS14Q8TCE9 139 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 SLC35D1Q9NTN3 355 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 SDHAF2Q9NX18 166 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 RHBDL2Q9NX52 303 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 FOXA2Q9Y261 457 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-208ENST00000588692 VSIG4Q9Y279 399 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 FBXO7Q9Y3I1 522 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 RBM7Q9Y580 266 aaKnown RBP11.26□□□□□ -0.61
DDX39A-208ENST00000588692 ETV7Q9Y603 341 aa11.26□□□□□ -0.61
DDX39A-208ENST00000588692 LOC100506127A0A0U1RQW1 187 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 TMEM127O75204 238 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 CTXN2P0C2S0 81 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 LGALS7P47929 136 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 RAB9AP51151 201 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 TIMM50Q3ZCQ8 353 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 ABHD5Q8WTS1 349 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 ADTRPQ96IZ2 230 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 KLK15Q9H2R5 256 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 NUBP2Q9Y5Y2 271 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 IGKV1D-8A0A087WSZ0 117 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 A0A1W2PN81 502 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 I3L521 148 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 FCN1O00602 326 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 CA2P00918 260 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 RRASP10301 218 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 HOXD3P31249 432 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-208ENST00000588692 CHRNA7P36544 502 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 GNG2P59768 71 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 KRTAP10-11P60412 298 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 MXD1Q05195 221 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 KIAA0141Q14154 515 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-208ENST00000588692 AKIRIN2Q53H80 203 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 PPP1R27Q86WC6 154 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 OR11H1Q8NG94 326 aa11.25□□□□□ -0.61
DDX39A-208ENST00000588692 ELF5Q9UKW6 265 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-208ENST00000588692 A0A0A6YYH2 397 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 TMEM235A6NFC5 223 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 A6NJ64 397 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 K7EIL1 84 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 SLC25A17O43808 307 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 OR8U8P0C7N1 319 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-208ENST00000588692 LINC00205P59089 165 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 RTL8BQ17RB0 113 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 ZNF260Q3ZCT1 412 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 TMEM177Q53S58 311 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 ACTBL2Q562R1 376 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 NUDCD2Q8WVJ2 157 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 ARPC1AQ92747 370 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 HARBI1Q96MB7 349 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 ST6GALNAC5Q9BVH7 336 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 RNF167Q9H6Y7 350 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 GNB4Q9HAV0 340 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 VCX3AQ9NNX9 186 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 A3GALT2U3KPV4 340 aa11.24□□□□□ -0.61
DDX39A-208ENST00000588692 SOX15O60248 233 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 TNFAIP8O95379 198 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 CLEC2LP0C7M8 214 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 CD40LGP29965 261 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 ZNF616Q08AN1 781 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 DCTN2Q13561 401 aaKnown RBP11.23□□□□□ -0.61
DDX39A-208ENST00000588692 C9orf66Q5T8R8 295 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 CNIH2Q6PI25 160 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 UNQ5815/PRO19632Q6UWF5 114 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 CROCCP3Q8IVE0 287 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 OR1N2Q8NGR9 330 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 C5orf30Q96GV9 206 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 OR2W1Q9Y3N9 320 aa11.23□□□□□ -0.61
DDX39A-208ENST00000588692 A0A087WXM4 84 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 RAMP3O60896 148 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 SLC22A5O76082 557 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 IGLV2-23P01705 113 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 DUTP33316 252 aaKnown RBP11.22□□□□□ -0.61
DDX39A-208ENST00000588692 LUMP51884 338 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-208ENST00000588692 DGCR2P98153 550 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 FXYD3Q14802 87 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 IDNKQ5T6J7 187 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 ZNF645Q8N7E2 425 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 BVESQ8NE79 360 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 LFNGQ8NES3 379 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 DDB2Q92466 427 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 SLC25A38Q96DW6 304 aa11.22□□□□□ -0.61
DDX39A-208ENST00000588692 FAM103A1Q9BTL3 118 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms