RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 RPA2P15927 270 aa21.2■□□□□ 0.99
SCAMP4-210ENST00000588555 VDAC1P21796 283 aa21.2■□□□□ 0.99
SCAMP4-210ENST00000588555 ZNF137PP52743 207 aa21.2■□□□□ 0.99
SCAMP4-210ENST00000588555 CLEC12BQ2HXU8 276 aa21.2■□□□□ 0.99
SCAMP4-210ENST00000588555 DEFB113Q30KQ7 82 aa21.2■□□□□ 0.99
SCAMP4-210ENST00000588555 OR10X1Q8NGY0 326 aa21.2■□□□□ 0.99
SCAMP4-210ENST00000588555 MMP26Q9NRE1 261 aa21.2■□□□□ 0.99
SCAMP4-210ENST00000588555 UNC79Q9P2D8 2635 aa21.2■□□□□ 0.98
SCAMP4-210ENST00000588555 FOXH1O75593 365 aa21.2■□□□□ 0.98
SCAMP4-210ENST00000588555 LPAR6P43657 344 aa21.2■□□□□ 0.98
SCAMP4-210ENST00000588555 ST6GALNAC6Q969X2 333 aa21.2■□□□□ 0.98
SCAMP4-210ENST00000588555 CLEC7AQ9BXN2 247 aa21.2■□□□□ 0.98
SCAMP4-210ENST00000588555 PIGBOS1A0A0B4J2F0 54 aa21.19■□□□□ 0.98
SCAMP4-210ENST00000588555 PRTN3P24158 256 aa21.19■□□□□ 0.98
SCAMP4-210ENST00000588555 LRRC75A-AS1Q8N1F1 130 aa21.19■□□□□ 0.98
SCAMP4-210ENST00000588555 UNKLQ9H9P5 680 aaKnown RBP21.19■□□□□ 0.98
SCAMP4-210ENST00000588555 KPTNQ9Y664 436 aa21.19■□□□□ 0.98
SCAMP4-210ENST00000588555 A0A0G2JRQ6 117 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 IGKV1-5P01602 117 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 THBS3P49746 956 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 ZNF383Q8NA42 475 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 ZBTB8BQ8NAP8 495 aaPredicted RBP21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 SIRT7Q9NRC8 400 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 S1PR2O95136 353 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 CT45A6P0DMU7 189 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 CT45A5P0DMU8 189 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 CT45A7P0DMV0 189 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 ZNF816Q0VGE8 651 aaPredicted RBP21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 HLA-DRB5Q30154 266 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 LRRC37A5PQ49AS3 106 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 FAM71F2Q6NXP2 309 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 BEND2Q8NDZ0 799 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 CD300LFQ8TDQ1 290 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 TMEM186Q96B77 213 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 ADTRPQ96IZ2 230 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 GSKIPQ9P0R6 139 aa21.18■□□□□ 0.98
SCAMP4-210ENST00000588555 TOR1AO14656 332 aa21.17■□□□□ 0.98
SCAMP4-210ENST00000588555 RBFOX2O43251 390 aaKnown RBP eCLIP21.17■□□□□ 0.98
SCAMP4-210ENST00000588555 SLC25A16P16260 332 aa21.17■□□□□ 0.98
SCAMP4-210ENST00000588555 COX7A1P24310 79 aa21.17■□□□□ 0.98
SCAMP4-210ENST00000588555 FGL1Q08830 312 aa21.17■□□□□ 0.98
SCAMP4-210ENST00000588555 LSM10Q969L4 123 aaKnown RBP21.17■□□□□ 0.98
SCAMP4-210ENST00000588555 SIRPDQ9H106 197 aa21.17■□□□□ 0.98
SCAMP4-210ENST00000588555 PRELID3BQ9Y3B1 194 aa21.17■□□□□ 0.98
SCAMP4-210ENST00000588555 FCGR3BO75015 233 aa21.16■□□□□ 0.98
SCAMP4-210ENST00000588555 MPC2O95563 127 aa21.16■□□□□ 0.98
SCAMP4-210ENST00000588555 PRRX1P54821 245 aa21.16■□□□□ 0.98
SCAMP4-210ENST00000588555 DIAPH2-AS1Q14236 149 aa21.16■□□□□ 0.98
SCAMP4-210ENST00000588555 HCP5Q6MZN7 132 aa21.16■□□□□ 0.98
SCAMP4-210ENST00000588555 PNKDQ8N490 385 aa21.16■□□□□ 0.98
SCAMP4-210ENST00000588555 MBD6Q96DN6 1003 aa21.16■□□□□ 0.98
SCAMP4-210ENST00000588555 COMMD9Q9P000 198 aa21.16■□□□□ 0.98
SCAMP4-210ENST00000588555 WNK2Q9Y3S1 2297 aa21.16■□□□□ 0.98
SCAMP4-210ENST00000588555 PSMB6P28072 239 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 FAM219AQ8IW50 185 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 OR11H6Q8NGC7 330 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 OR4P4Q8NGL7 312 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 OR13D1Q8NGV5 346 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 GRPEL2Q8TAA5 225 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 A0A096LNT2 108 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 MMP9P14780 707 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 KIR2DS2P43631 304 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 LAMTOR1Q6IAA8 161 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 GPR146Q96CH1 333 aa21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 MRPL20Q9BYC9 149 aaKnown RBP21.15■□□□□ 0.98
SCAMP4-210ENST00000588555 CSMD1Q96PZ7 3565 aa21.14■□□□□ 0.98
SCAMP4-210ENST00000588555 P0C879 139 aa21.14■□□□□ 0.97
SCAMP4-210ENST00000588555 RAB32Q13637 225 aa21.14■□□□□ 0.97
SCAMP4-210ENST00000588555 VMO1Q7Z5L0 202 aa21.14■□□□□ 0.97
SCAMP4-210ENST00000588555 OR4D5Q8NGN0 318 aa21.14■□□□□ 0.97
SCAMP4-210ENST00000588555 SPIN2AQ99865 258 aa21.14■□□□□ 0.97
SCAMP4-210ENST00000588555 SPIN2BQ9BPZ2 258 aa21.14■□□□□ 0.97
SCAMP4-210ENST00000588555 PLEKHA2Q9HB19 425 aa21.14■□□□□ 0.97
SCAMP4-210ENST00000588555 LPAR2Q9HBW0 351 aa21.14■□□□□ 0.97
SCAMP4-210ENST00000588555 BUB1B-PAK6H3BSN5 160 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 AKR1C2P52895 323 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 C11orf87Q6NUJ2 197 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 C9orf62Q8N4C0 152 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 HEXA-AS1Q9H8Q6 139 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 H0YIZ8 118 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 HPRT1P00492 218 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 SLC25A4P12235 298 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 SLC25A6P12236 298 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 USF1P22415 310 aaPredicted RBP21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 IL3RAP26951 378 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 REG1BP48304 166 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 DVL1P1P54792 670 aaPredicted RBP21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 KLRD1Q13241 179 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 IZUMO4Q1ZYL8 232 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 Q6ZRM9 215 aa21.13■□□□□ 0.97
SCAMP4-210ENST00000588555 ITPR2Q14571 2701 aa21.12■□□□□ 0.97
SCAMP4-210ENST00000588555 ODF3BA8MYP8 253 aa21.12■□□□□ 0.97
SCAMP4-210ENST00000588555 KRASP01116 189 aa21.12■□□□□ 0.97
SCAMP4-210ENST00000588555 G6PCP35575 357 aa21.12■□□□□ 0.97
SCAMP4-210ENST00000588555 OR4S2Q8NH73 311 aa21.12■□□□□ 0.97
SCAMP4-210ENST00000588555 RRNAD1Q96FB5 475 aaKnown RBP21.12■□□□□ 0.97
SCAMP4-210ENST00000588555 NABP2Q9BQ15 211 aa21.12■□□□□ 0.97
SCAMP4-210ENST00000588555 RNF126Q9BV68 326 aa21.12■□□□□ 0.97
SCAMP4-210ENST00000588555 MMP24Q9Y5R2 645 aa21.12■□□□□ 0.97
SCAMP4-210ENST00000588555 FXYD6-FXYD2A0A087WZ82 144 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms