RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 AQP3Q92482 292 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 SNRNP40Q96DI7 357 aaKnown RBP8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 TMEM222Q9H0R3 208 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 AURKAIP1Q9NWT8 199 aaPredicted RBP8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 HSF4Q9ULV5 492 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 TMSB15BA0A087X1C1 80 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 CEACAM18A8MTB9 384 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 IGHV3-48P01763 117 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 OR4A5Q8NH83 315 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 FAM216AQ8WUB2 273 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 PHYHIPLQ96FC7 376 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 COL4A6Q14031 1691 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 H0Y980 276 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 J3QW42 95 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 PMCHP20382 165 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 SAXO1Q8IYX7 474 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 TMEM204Q9BSN7 226 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 SRD5A3Q9H8P0 318 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 TRAPPC1Q9Y5R8 145 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 ARL2-SNX15V9GYD0 113 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 THSD7BQ9C0I4 1608 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 LOC390937A0A1W2PQ73 354 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 KIAA1324LA8MWY0 1029 aaPredicted RBP8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 REG1AP05451 166 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 MUC1P15941 1255 aaPredicted RBP8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 COL8A1P27658 744 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 KRTDAPP60985 99 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 SLC35E3Q7Z769 313 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 ALX4Q9H161 411 aaPredicted RBP8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 NPVFQ9HCQ7 196 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 TMEM140Q9NV12 185 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 SPRR3Q9UBC9 169 aa8.29□□□□□ -1.08
GPATCH8-205ENST00000587228 ZNF729A6NN14 1252 aaPredicted RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 TMEM14DPA8MWL7 114 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 H0YL77 283 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 RAB5AP20339 215 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 GALR1P47211 349 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 SUMO1P63165 101 aaKnown RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 LINC00114Q6XXX2 140 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 C16orf82Q7Z2V1 217 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 ZNF561Q8N587 486 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 FAM24BQ8N5W8 94 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 C5orf17Q8NAS9 161 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 C1orf162Q8NEQ5 155 aaPredicted RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 NIT2Q9NQR4 276 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 DUXBA0A1W2PPF3 345 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 MARCH11A6NNE9 402 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 HYPMO75409 117 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 TGFAP01135 160 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 RND2P52198 227 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 SPCS3P61009 180 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 DEFA6Q01524 100 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 TMEM252Q8N6L7 170 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 RNASE6Q93091 150 aaKnown RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 NOL4LQ96MY1 436 aaPredicted RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 DCTN5Q9BTE1 182 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 SONP18583 2426 aaKnown RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 FCN1O00602 326 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 MBPP02686 304 aaPredicted RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 P2RY4P51582 365 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 FOXF2Q12947 444 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 BSXQ3C1V8 233 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 UQCC3Q6UW78 93 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 LRRC75AQ8NAA5 344 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 ZNF646O15015 1829 aaPredicted RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 LYNX1G3V0Z9 82 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 CSN3P07498 182 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 LYNX1P0DP58 116 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 FOXG1P55316 489 aaPredicted RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 RPL30P62888 115 aaKnown RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 LGALSLQ3ZCW2 172 aaPredicted RBP8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 RSG1Q9BU20 258 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 OR5AC2Q9NZP5 309 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 JPT1Q9UK76 154 aa8.28□□□□□ -1.08
GPATCH8-205ENST00000587228 MYO18BQ8IUG5 2567 aa8.27□□□□□ -1.08
GPATCH8-205ENST00000587228 ZSWIM8A7E2V4 1837 aa8.27□□□□□ -1.08
GPATCH8-205ENST00000587228 SHISA3A0PJX4 238 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 S1PR2O95136 353 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 LINC00869P0C866 280 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 PRB3Q04118 309 aaPredicted RBP8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 TBR1Q16650 682 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 ANKRD55Q3KP44 614 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 FAM209AQ5JX71 171 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 PRSS3P2Q8NHM4 247 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 RGP1Q92546 391 aaPredicted RBP8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 FAM168AQ92567 244 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 GPR146Q96CH1 333 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 REPIN1Q9BWE0 567 aaKnown RBP8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 HIGD1AQ9Y241 93 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 MRPS18CQ9Y3D5 142 aaKnown RBP8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 PTPN13Q12923 2485 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 PHF3Q92576 2039 aaKnown RBP8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 DGAT2L7PQ6IED9 249 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 RNASEKQ6P5S7 137 aaKnown RBP8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 PCSK4Q6UW60 755 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 ACP7Q6ZNF0 438 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 RBM14Q96PK6 669 aaKnown RBP8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 ZGRF1Q86YA3 2104 aa8.27□□□□□ -1.09
GPATCH8-205ENST00000587228 TGOLN2O43493 480 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms