RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	ATG5	Q9H1Y0	275 aa		12.89	□□□□□ -0.35
CIRBP-204	ENST00000585630	RNF150	Q9ULK6	438 aa		12.89	□□□□□ -0.35
CIRBP-204	ENST00000585630	TRBV6-7	A0A0A0MS04	114 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	TRAV41	A0A0B4J266	112 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630		G3V318	75 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	SPDEF	O95238	335 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	IGLV1-40	P01703	118 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	APOA2	P02652	100 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	GSTP1	P09211	210 aa	Known RBP	12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	SNRPB	P14678	240 aa	Known RBP	12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	ARFRP1	Q13795	201 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	SPCS2	Q15005	226 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	SRSF7	Q16629	238 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	C19orf54	Q5BKX5	351 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	PDPN	Q86YL7	162 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	ZNF383	Q8NA42	475 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	OR10J5	Q8NHC4	309 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	LGALS14	Q8TCE9	139 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	MAFIP	Q8WZ33	124 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	DPF1	Q92782	380 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	RNF5	Q99942	180 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	OR2D2	Q9H210	308 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	ZNF230	Q9UIE0	474 aa	Predicted RBP	12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	FBXO7	Q9Y3I1	522 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	WSB1	Q9Y6I7	421 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630	COL7A1	Q02388	2944 aa		12.88	□□□□□ -0.35
CIRBP-204	ENST00000585630		M0R1X1	148 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	SCGN	O76038	276 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	IGKV1-16	P04430	117 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	GSTT2	P0CG29	244 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	GSTT2B	P0CG30	244 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	DTYMK	P23919	212 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	FHL3	Q13643	280 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	PLGLA	Q15195	96 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	IDNK	Q5T6J7	187 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	ZNF660	Q6AZW8	331 aa	Predicted RBP	12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	MINDY2	Q8NBR6	621 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	DCSTAMP	Q9H295	470 aa		12.87	□□□□□ -0.35
CIRBP-204	ENST00000585630	OR8U9	P0C7N5	309 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	HOXD3	P31249	432 aa	Predicted RBP	12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	TALDO1	P37837	337 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	LINC00205	P59089	165 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	KRTAP10-11	P60412	298 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	CX3CL1	P78423	397 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	ECSCR	Q19T08	205 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	TCTEX1D1	Q8N7M0	179 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	C5orf30	Q96GV9	206 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	UBE2E2	Q96LR5	201 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	TSNAX	Q99598	290 aa	Known RBP	12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	GINS4	Q9BRT9	223 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	KLK15	Q9H2R5	256 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	SDHAF2	Q9NX18	166 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	METTL1	Q9UBP6	276 aa	Known RBP	12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	ELF5	Q9UKW6	265 aa	Predicted RBP	12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	GAB2	Q9UQC2	676 aa		12.86	□□□□□ -0.35
CIRBP-204	ENST00000585630	IGKV1D-8	A0A087WSZ0	117 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630		K7EIL1	84 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	SOX15	O60248	233 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	RPS19	P39019	145 aa	Known RBP	12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	SCAND1	P57086	179 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	RAB25	P57735	213 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	KIAA0141	Q14154	515 aa	Predicted RBP	12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	PSG5	Q15238	335 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	HACD4	Q5VWC8	232 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	TMEM65	Q6PI78	240 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	OR5H6	Q8NGV6	325 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	GNB4	Q9HAV0	340 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	SLC35D1	Q9NTN3	355 aa		12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630	FOXA2	Q9Y261	457 aa	Predicted RBP	12.85	□□□□□ -0.35
CIRBP-204	ENST00000585630		A0A1W2PN81	502 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	TMEM235	A6NFC5	223 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	FCN1	O00602	326 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	CA2	P00918	260 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	CHRNA7	P36544	502 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	RUNX1	Q01196	453 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	CDNF	Q49AH0	187 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	ZNF491	Q8N8L2	437 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	OR5M8	Q8NGP6	311 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	NUDCD2	Q8WVJ2	157 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	TPSG1	Q9NRR2	321 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	RHBDL2	Q9NX52	303 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	VSIG4	Q9Y279	399 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630	ETV7	Q9Y603	341 aa		12.84	□□□□□ -0.35
CIRBP-204	ENST00000585630		I3L521	148 aa		12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	SLC25A17	O43808	307 aa		12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	EGR2	P11161	476 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	RPS16	P62249	146 aa	Known RBP	12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	PITPNA	Q00169	270 aa		12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	DYNC2LI1	Q8TCX1	351 aa		12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	ABHD5	Q8WTS1	349 aa		12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	FLYWCH2	Q96CP2	140 aa	Known RBP	12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	SLC25A38	Q96DW6	304 aa		12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	NUBP2	Q9Y5Y2	271 aa		12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	A3GALT2	U3KPV4	340 aa		12.83	□□□□□ -0.36
CIRBP-204	ENST00000585630	WI2-2373I1.2	A0A1W2PRP0	233 aa		12.82	□□□□□ -0.36
CIRBP-204	ENST00000585630	IGLV2-23	P01705	113 aa		12.82	□□□□□ -0.36
CIRBP-204	ENST00000585630	RAB9A	P51151	201 aa		12.82	□□□□□ -0.36
CIRBP-204	ENST00000585630	GNB1	P62873	340 aa		12.82	□□□□□ -0.36
CIRBP-204	ENST00000585630	TAGLN	Q01995	201 aa	Known RBP	12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms